Pairwise Alignments

Query, 812 a.a., DNA gyrase, A subunit (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 917 a.a., DNA topoisomerase IV from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  176 bits (446), Expect = 5e-48
 Identities = 161/597 (26%), Positives = 280/597 (46%), Gaps = 79/597 (13%)

Query: 15  YLEYSLSVIIGRAIPDARDGLKPVHRRIMFAQHELGNGYTRPPKKSARVVGDVIGKYHPH 74
           +L+Y+  VI+ RA+P   DGLKPV RRI+ A  E+ +G      K A V+G  + +YHPH
Sbjct: 44  FLDYASYVILERAVPAIEDGLKPVQRRILHAMREMDDGRFN---KVANVIGQTM-QYHPH 99

Query: 75  GDSAVYDALVRMAQDFSMRDPLVDGQGNFGSI-DGDAAAAMRYTEVRMSRLAGEFLADID 133
           GD+++ DA+V + Q    +D L++ QGN+G    GD+AAA RY E R+S+ A + +   +
Sbjct: 100 GDASIGDAMVNLGQ----KDLLIETQGNWGDARTGDSAAAPRYIEARLSKFALDVV--FN 153

Query: 134 KETVDFRPNYDNTLLEPSVLPTKVPNLLLNGSSGIAVGMATNIPPHNLGELCGALLHIVD 193
            +T  ++ +YD    EP  LP K P LL  G  GIAVG++T I PHN  EL  A + ++ 
Sbjct: 154 PQTTLWQLSYDGRKNEPVTLPVKFPLLLAQGVEGIAVGLSTKIMPHNFRELIKASVDVLK 213

Query: 194 EPGCTVEDLMDHVKGPDFPTAGFVYAGQGLYDAYTTGRGTVKVRGKVEIEERKKGLQAIV 253
                +         PDF T G +         Y  G+   ++R +  IE+  K +  +V
Sbjct: 214 GRSTNLL--------PDFLTGGQIDVTN-----YNGGQRGGRIRVRATIEKVDKTM--LV 258

Query: 254 IREIPFALNKSSLVEKI--AALVNERKIDGVADLRDESDRKGIRVVIDLKRGTIPDIVVN 311
           IR++P+    + L+E I  A+  N+ KI  V D    +    + + + L  G  PD+ ++
Sbjct: 259 IRDVPYGTTTTGLMESIVKASENNKIKIKRVVD----NTAADVEIQVQLPPGVSPDLTMD 314

Query: 312 ALYKYTPLESSFGINMLAVVGNRPQLLNLKQALEIFLEHRREVIIRRTRYDLRKAEARAH 371
           ALY +T  E S   N   ++ ++P  L++ + L I      +++ R       + E + H
Sbjct: 315 ALYAFTDCEVSISPNACVIINDKPHFLDVNELLRISTFKTVDLLKRELEIRKGELEDKWH 374

Query: 372 ILEGLRIALDN-----IDEV---VALIRASKTPQDAKDALMGRFTLSEAQAQAILDMRLQ 423
                +I ++N     I+E     A++ A     D    L+ R  ++E     + +++++
Sbjct: 375 YSSLEKIFIENRIYRDIEECETWEAVLNAIDRGLDPYKHLLRR-EVTEEDIIRLTEIKIK 433

Query: 424 RLTNLEHEKLIEEYNELLKKIEFFRSVLENPEVLRSVIREEIGELRDTF-----ATKRRT 478
           R++  +  K     +E + K+E    + E  + L ++IR  I              +RRT
Sbjct: 434 RISKYDSFKA----DEYIHKLE--EEMAEVDDNLANLIRYAIAYFEGLLKKYGQGKERRT 487

Query: 479 EVLEEELDGIDIEDLIPDEDVVITLSRRGYIKRTTLDNYQQQRRGGKGIAGVHTSEDDFV 538
           +V           D+I  ++V I              N +       G  G    +D+FV
Sbjct: 488 QV--------KTFDVINAQNVAIA-------------NQKLYMNAKDGFIGTGLRKDEFV 526

Query: 539 QDFLTTTNHQYLLLFTNHGRMHQIKVHRVPEGSRTAKGVHIANLVQLDKDELVTNVL 595
            D    ++   +++F   G+     V +V E +   K +  A +   + + +V N++
Sbjct: 527 CD---CSDMDDIIVFRKDGK---FMVTKVAEKTFVGKDIIYAGVYNKNDEHMVYNMI 577