Pairwise Alignments

Query, 315 a.a., shikimate 5-dehydrogenase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 272 a.a., Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 98.2 bits (243), Expect = 2e-25
 Identities = 89/278 (32%), Positives = 120/278 (43%), Gaps = 33/278 (11%)

Query: 10  ELYGIIGHPLGHTMSPLLHNWGFSLLDVPAVYMAWPLEPGRVGDFITAVRTLPI---RGA 66
           E Y + G+P+ H+ SP +H      LD+   Y    L P  + +FI  +        +GA
Sbjct: 2   ETYAVFGNPIAHSKSPFIHQQFAQQLDIVHPY-GRVLAP--INNFINTLDAFFAAGGKGA 58

Query: 67  SVTIPHKQAVLPLLDGVSDRARAVGAVNTL-YWRDGQLLGENTDVTGFLAPLRQRAAAGW 125
           ++T+P K+      D +++RA   GAVNTL    DG+LLG+NTD  G L  L +R     
Sbjct: 59  NITVPFKEEAFARSDELTERASLAGAVNTLKRLEDGRLLGDNTDGIGLLGDL-ERLNFIR 117

Query: 126 RCERALVLGNGGAARAVLAGLRELGPAGDGVVRAVGVTGRNAEKAAPLAAEF----GAEV 181
              R L++G GGA+R VL  L  L         AV +T R A +A  LA  F        
Sbjct: 118 PGLRILLIGAGGASRGVLLPLLSLD-------CAVTITNRTASRAEALAKIFAHTGSVHA 170

Query: 182 VDWDARVHWGADLVVNTTPMGMSGERQGDTAFPEQGFAAQGVAAGGDGRRGLAYDLVYNP 241
            D D       DL++N T  G+ GE                + A         YD+ Y  
Sbjct: 171 TDMDKLDGCEFDLIINATSSGIRGE-------------IPAIPASLIHPSLCCYDMFYQK 217

Query: 242 LRTRFLSEAADAGWDT-QDGLGMFVEQGREQFRLWTGL 278
             T FLS     G     DGLGM V Q      LW G+
Sbjct: 218 GNTPFLSWCVQQGAKRYADGLGMLVGQAAHAVLLWHGV 255