Pairwise Alignments

Query, 315 a.a., shikimate 5-dehydrogenase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 272 a.a., dehydroshikimate reductase, NAD(P)-binding from Escherichia coli BL21

 Score =  105 bits (261), Expect = 2e-27
 Identities = 90/275 (32%), Positives = 126/275 (45%), Gaps = 27/275 (9%)

Query: 10  ELYGIIGHPLGHTMSPLLHNWGFSLLDVPAVYMAWPLEPGRVGDFITAVRTLPI---RGA 66
           E Y + G+P+ H+ SP +H      L++   Y    L P  + DFI  +        +GA
Sbjct: 2   ETYAVFGNPIAHSKSPFIHQQFAQQLNIEHPY-GRVLAP--INDFINTLNAFFSAGGKGA 58

Query: 67  SVTIPHKQAVLPLLDGVSDRARAVGAVNTLY-WRDGQLLGENTDVTGFLAPLRQRAAAGW 125
           +VT+P K+      D +++RA   GAVNTL    DG+LLG+NTD  G L+ L +R +   
Sbjct: 59  NVTVPFKEEAFARADELTERAALAGAVNTLMRLEDGRLLGDNTDGVGLLSDL-ERLSFIR 117

Query: 126 RCERALVLGNGGAARAVLAGLRELGPAGDGVVRAVGVTGRNAEKAAPLAAEFGA-EVVDW 184
              R L++G GGA+R VL  L  L    D  V     T   AE+ A L A  G+ + +  
Sbjct: 118 PGLRILLIGAGGASRGVLLPLLSL----DCAVTITNRTVSRAEELAKLFAHTGSIQALSM 173

Query: 185 DARVHWGADLVVNTTPMGMSGERQGDTAFPEQGFAAQGVAAGGDGRRGLAYDLVYNPLRT 244
           D       DL++N T  G+S    GD           G+           YD+ Y   +T
Sbjct: 174 DELEGHEFDLIINATSSGIS----GDIPAIPSSLIHPGI---------YCYDMFYQKGKT 220

Query: 245 RFLSEAADAGWD-TQDGLGMFVEQGREQFRLWTGL 278
            FL+     G     DGLGM V Q    F LW G+
Sbjct: 221 PFLAWCEQRGSKRNADGLGMLVAQAAHAFLLWHGV 255