Pairwise Alignments

Query, 266 a.a., spermidine/putrescine ABC transporter membrane protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 281 a.a., putrescine ABC transporter permease PotI from Escherichia coli ECRC98

 Score =  189 bits (481), Expect = 4e-53
 Identities = 99/258 (38%), Positives = 157/258 (60%), Gaps = 7/258 (2%)

Query: 16  RTGLVWLVYAFLYVPILVVIVYSFNDARYTTEWKGFTLKWYSALAANGPLVDAALNSLSV 75
           R  ++ L + FLY P+L++++YSFN ++  T W G++ +WY  L  +  ++ A   SL++
Sbjct: 12  RIVILLLGFTFLYAPMLMLVIYSFNSSKLVTVWAGWSTRWYGELLRDDAMMSAVGLSLTI 71

Query: 76  ATLAATIATVLGTLAAICIRRY-RFPGRKVLHGCIYVLTVSPDIVMGISLLIFFIAMGVQ 134
           A  AAT A +LGT+AA+ + R+ RF G       I    V PD++ G+SLL+ F+A+   
Sbjct: 72  AACAATAAAILGTIAAVVLVRFGRFRGSNGFAFMITAPLVMPDVITGLSLLLLFVALAHA 131

Query: 135 LGF------WTLLAAHVTLALPFVTVTVLARLAEFDEQLIEAARDLGASEWRAFRHVLLP 188
           +G+       T+  AHVT    +V V + +RL E D  + EAA DLGA+  + F  + LP
Sbjct: 132 IGWPADRGMLTIWLAHVTFCTAYVAVVISSRLRELDRSIEEAAMDLGATPLKVFFVITLP 191

Query: 189 LAAPAVAAGWLLSFTLSMDDVLVSFFVTGPTFEVLPLRVYSMVRLGVKPDINALSAVMFT 248
           +  PAV +GWLL+FTLS+DD++++ FV+GP    LP+ V+S VR+GV P+INAL+ ++  
Sbjct: 192 MIMPAVISGWLLAFTLSLDDLVIASFVSGPGATTLPMLVFSSVRMGVNPEINALATLILG 251

Query: 249 VTIVLVLLAQTLTRTRRK 266
              ++  +A  L     K
Sbjct: 252 AVGIVGFIAWYLMARAEK 269