Pairwise Alignments

Query, 266 a.a., spermidine/putrescine ABC transporter membrane protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 264 a.a., spermidine/putrescine ABC transporter permease PotC from Escherichia coli ECOR27

 Score =  296 bits (758), Expect = 3e-85
 Identities = 135/254 (53%), Positives = 198/254 (77%)

Query: 13  RTLRTGLVWLVYAFLYVPILVVIVYSFNDARYTTEWKGFTLKWYSALAANGPLVDAALNS 72
           R LR G +  +YA+LY+PI+++IV SFN +R+   W+GFT KWYS L  N  L+ AA +S
Sbjct: 4   RLLRGGFMTAIYAYLYIPIIILIVNSFNSSRFGINWQGFTTKWYSLLMNNDSLLQAAQHS 63

Query: 73  LSVATLAATIATVLGTLAAICIRRYRFPGRKVLHGCIYVLTVSPDIVMGISLLIFFIAMG 132
           L++A  +AT AT++G+L A+ + RYRF G+  + G ++V+ +SPDIVM ISLL+ F+ +G
Sbjct: 64  LTMAVFSATFATLIGSLTAVALYRYRFRGKPFVSGMLFVVMMSPDIVMAISLLVLFMLLG 123

Query: 133 VQLGFWTLLAAHVTLALPFVTVTVLARLAEFDEQLIEAARDLGASEWRAFRHVLLPLAAP 192
           +QLGFW+LL +H+T  LPFV VTV +RL  FD +++EAA+DLGASE+   R ++LPLA P
Sbjct: 124 IQLGFWSLLFSHITFCLPFVVVTVYSRLKGFDVRMLEAAKDLGASEFTILRKIILPLAMP 183

Query: 193 AVAAGWLLSFTLSMDDVLVSFFVTGPTFEVLPLRVYSMVRLGVKPDINALSAVMFTVTIV 252
           AVAAGW+LSFTLSMDDV+VS FVTGP++E+LPL++YSMV++GV P++NAL+ ++  +++V
Sbjct: 184 AVAAGWVLSFTLSMDDVVVSSFVTGPSYEILPLKIYSMVKVGVSPEVNALATILLVLSLV 243

Query: 253 LVLLAQTLTRTRRK 266
           +V+ +Q + R + K
Sbjct: 244 MVIASQLIARDKTK 257