Pairwise Alignments

Query, 266 a.a., spermidine/putrescine ABC transporter membrane protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 291 a.a., spermidine/putrescine transport system permease protein potC from Caulobacter crescentus NA1000 Δfur

 Score =  209 bits (532), Expect = 5e-59
 Identities = 105/249 (42%), Positives = 158/249 (63%), Gaps = 9/249 (3%)

Query: 21  WL--VYAFLYVPILVVIVYSFNDARYTTEWKGFTLKWYSALAANGPLVDAALNSLSVATL 78
           WL  V+ FLY P++ ++ +SFND++    WKGFTLK+Y  L  N  L++A  NSL++A  
Sbjct: 27  WLAAVFIFLYAPLIALMAFSFNDSKRNIVWKGFTLKYYEKLFNNSELLEAFGNSLTIAAA 86

Query: 79  AATIATVLGTLAAICIRRYRFPGRKVLHGCIYVLTVSPDIVMGISLLIFFI-------AM 131
           +  I+  LG   A+ + R+RFPG+  + G + +  V P+I MG+++L+FF         M
Sbjct: 87  STVISLFLGAAVALALWRFRFPGKTAVDGAMALPIVVPEICMGVAMLVFFAKVLPWPQGM 146

Query: 132 GVQLGFWTLLAAHVTLALPFVTVTVLARLAEFDEQLIEAARDLGASEWRAFRHVLLPLAA 191
              L    ++ AHV+ + PFV V V AR+A F+ ++ EAARDLGA E+R  + V+LP  A
Sbjct: 147 PWPLNLGAIIIAHVSFSFPFVAVVVRARMASFNREMEEAARDLGAGEFRTIKDVILPHMA 206

Query: 192 PAVAAGWLLSFTLSMDDVLVSFFVTGPTFEVLPLRVYSMVRLGVKPDINALSAVMFTVTI 251
           P++ AG LL+FTLS+DD +++FF  GP     P++VYSMVR  V P++NA S V+  +T+
Sbjct: 207 PSLIAGALLAFTLSLDDFVITFFTAGPDTVTFPVKVYSMVRFSVTPEVNAASTVLIVLTV 266

Query: 252 VLVLLAQTL 260
           +L   A  L
Sbjct: 267 LLTAAALKL 275