Pairwise Alignments

Query, 395 a.a., protein of unknown function DUF939 (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 717 a.a., Putative efflux (PET) family inner membrane protein YccS from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 55.1 bits (131), Expect = 6e-12
 Identities = 37/176 (21%), Positives = 78/176 (44%), Gaps = 4/176 (2%)

Query: 12  AHIRHGIKTGIAAVLALVLANVLHIEYGYWAVISAVIAMQMNVAEAIEMCLYRFIGTVMG 71
           A  RH ++  +   +   L  +  + +GYW +++++   Q N          R IGT++G
Sbjct: 389 ALFRHAVRMSLVLCIGYALIQITGMRHGYWILLTSLFVCQPNYNATRHRLALRIIGTLVG 448

Query: 72  AVMGVGAIMVFPDTPVWNGVSVFVTTGLCAFLTRWDPRYRMAAITVSIVILASAG-HAER 130
             +G+  +   P   +   + + V TG+  F  R + +Y  A + +++++L       E 
Sbjct: 449 VAIGLPILWFVPS--LEGQLVLLVITGVLFFAFR-NVQYAHATMFITLLVLLCFNLLGEG 505

Query: 131 IDVGLFRVLEIAVGVGCAFVVTVTLWPVRAAVGLRRDLAAQAEDCADHLTTLVDNF 186
            +V L RV++  +G   A+     +WP      L R L    +    +L  +++ +
Sbjct: 506 FEVALPRVVDTLIGCAIAWAAVSFIWPDWRFRNLPRVLQRATDANCRYLDAILEQY 561