Pairwise Alignments

Query, 313 a.a., inner-membrane translocator (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 327 a.a., Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) from Variovorax sp. SCN45

 Score =  136 bits (342), Expect = 8e-37
 Identities = 99/312 (31%), Positives = 167/312 (53%), Gaps = 26/312 (8%)

Query: 6   VPLVVLAMLAGLPLLGLNSYVMHILILSIMWTLAGMAWNLLGGYCGQVSFGHAAFFGMGA 65
           V L +  +LA LP    + YV++++ L +++++  +  +L+ G  GQ +  HAAFFG+G 
Sbjct: 15  VLLGMAVVLAVLPFT-TSGYVLYVVNLLMVFSVLALGMHLVIGETGQFALSHAAFFGIGI 73

Query: 66  YSAGLIHLHLGLSPWWG-FLVSLPLVALVALAMGSVV----LRLRGPYFVLATLAIGEVL 120
           Y+AGLI+     + W   F VS+   AL++ A+G V+    LR+R  Y  LAT A GE +
Sbjct: 74  YTAGLIN-----NQWQPPFFVSILAGALLSAALGWVIGLLALRMRDIYLALATFAFGEAM 128

Query: 121 RITCENLTDFTKGTLGIMITRT------WVEKTQYYYIILGLALLGFVVCRAIVHSRWGY 174
           +    N    T G+ G+ +          +   Q Y  ++ +A L   +   +  SR G 
Sbjct: 129 QWVFLNWESVTNGSNGLQMKPASLGGYQLMNDLQAYPFVIAIAALMLWLTVTLSRSRLGS 188

Query: 175 YFVAIREDQDAAESMGIDTTRYKTIALTVSAMLTGLAGAFYTNYMGYIDPGVVFSLG-EI 233
            F A+RE   AA +MG++T   K  A  +SA   G+AG  YT +  +I P    SLG + 
Sbjct: 189 SFRAVRESDVAAVAMGVNTRTVKVTAFVLSAAFAGVAGGMYTLFTSFIHPE---SLGFQT 245

Query: 234 SILIIMVVMVGGVATEWGPALGAGIMVILAEYIRSLPLIGVAYQ-TMFGVLLIVIIIYLP 292
           +ILI+ +V+VGG+ +  G   GA +  + +E +R  P    +YQ  ++G +L++ +++LP
Sbjct: 246 TILILTMVVVGGLGSVRGAVAGAIVFGLASELLRQAP----SYQEIIYGGILMLFMMFLP 301

Query: 293 NGLVGDWPVLRR 304
            G+   +   R+
Sbjct: 302 KGMASLFAARRK 313