Pairwise Alignments

Query, 313 a.a., inner-membrane translocator (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 326 a.a., ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  185 bits (469), Expect = 1e-51
 Identities = 103/305 (33%), Positives = 176/305 (57%), Gaps = 15/305 (4%)

Query: 5   LVPLVVLAMLAG-LPLLGLNSYVMHILILSIMWTLAGMAWNLLGGYCGQVSFGHAAFFGM 63
           L  + + A+L G +P    +  V++ +++++  TL   AWN+LGG+ GQ SFGHA FFG 
Sbjct: 8   LAGIALFAVLIGCVPFATSSGVVLNFVMMALYATLIAQAWNILGGFGGQFSFGHALFFGT 67

Query: 64  GAYSAGLIHLHLGLSPWWGFLVSLPLVALVALAMGSVVLR--LRGPYFVLATLAIGEVLR 121
           GAY   +  L  G++ W    +++   ++V L +G++  R  L+G YF L TLA  EV R
Sbjct: 68  GAYIQAIAQLQGGINAWLALPLAVAGASVVGLFVGALTFRYGLKGSYFALVTLAFAEVFR 127

Query: 122 ITCENLTDFTKGTLGIMI-------TRTWVEKTQYYYIILGLALLGFVVCRAIVHSRWGY 174
           I   ++ DFT G +G+M+          +  +  Y  ++L + +   +V   + + R+G 
Sbjct: 128 IVALSV-DFTGGGVGLMVPLRESVSNLQFTTRAGYLRVVLAMVVAALLVTWWLRNGRFGA 186

Query: 175 YFVAIREDQDAAESMGIDTTRYKTIALTVSAMLTGLAGAFYTNYMGYIDPGVVFSLGEIS 234
           Y  A+R+++DAA ++G++  R K  A+ +SA   G AGAFY     YID G+ +     S
Sbjct: 187 YLQAVRDNEDAARAVGVNPFRIKLAAIGISAAFMGAAGAFYVQVFQYIDAGIAYG-SLTS 245

Query: 235 ILIIMVVMVGGVATEWGPALGAGIMVILAEYIRSL--PLIGVAYQTMFGVLLIVIIIYLP 292
           +  ++  +VGG+ T WGP LGA ++ +L++  R+L   L G+    ++G +L++I+I+LP
Sbjct: 246 VEALVAAIVGGMGTLWGPVLGAAVLHLLSDLTRNLFGELPGI-NMVIYGSVLVLIVIFLP 304

Query: 293 NGLVG 297
            G+ G
Sbjct: 305 RGIAG 309