Pairwise Alignments

Query, 313 a.a., inner-membrane translocator (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 336 a.a., branched-chain amino acid ABC transporter permease from Pseudomonas fluorescens SBW25

 Score =  148 bits (374), Expect = 2e-40
 Identities = 100/311 (32%), Positives = 165/311 (53%), Gaps = 20/311 (6%)

Query: 8   LVVLAMLAGLPLLGLNSYVMHILILSIMWTLAGMAWNLLGGYCGQVSFGHAAFFGMGAYS 67
           L VLA+L GLPL  L S  +   IL  ++ +A +A NLL GY G +SFG   FFG GAY 
Sbjct: 19  LWVLAVLIGLPLT-LPSATLATEIL--IFAMAALACNLLLGYTGLLSFGQGIFFGAGAYC 75

Query: 68  AGLIHLHLGLSPWWGFLVSLPLVALVALAMGSVVLRLRGPYFVLATLAIGEVLRITCENL 127
           A L+ +HL L  +   L +      +AL +G++ +R  G YFV+ TLA  ++       L
Sbjct: 76  AALLMIHLQLGLFTALLGAAIAGGFLALLVGALAIRRTGIYFVMLTLAFSQMAYFVAYTL 135

Query: 128 TDFTKGTLGIM------------ITRTWVEKTQYYYIILGLALLGFVVCRAIVHSRWGYY 175
           +D+T G  G++            +  +  +   +Y  +  L LL F+  R ++ S +G  
Sbjct: 136 SDWTGGDNGLLSVPRPEIRLGDTVLLSLADARAFYGFVAVLFLLIFIGARRVIASPFGST 195

Query: 176 FVAIREDQDAAESMGIDTTRYKTIALTVSAMLTGLAGAFYTNYMGYIDPGVVFSLGEISI 235
            +AIRE++  A ++G DT  +K +   +S  +TG+AGA Y   + ++    +      +I
Sbjct: 196 LMAIRENETRASAIGYDTRHFKILVFVLSGAVTGIAGALYAMLLHFVPLSNIDLAMSENI 255

Query: 236 LIIMVVMVGGVATEWGPALGAGIMVILAEYIRSLPLIGVAYQTMFGVLLIVIIIYLPNGL 295
           LI+ +  VGG  + +G  LGAG +V+L +++  L      +  + GV+LI+++I++  GL
Sbjct: 256 LIMTI--VGGTGSLFGSLLGAGSIVLLGDFLSDL---WPRWLMLLGVILILVVIFMRGGL 310

Query: 296 VGDWPVLRRKL 306
            G    L  K+
Sbjct: 311 WGGLASLFEKV 321