Pairwise Alignments

Query, 313 a.a., inner-membrane translocator (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 358 a.a., Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  133 bits (334), Expect = 7e-36
 Identities = 97/319 (30%), Positives = 168/319 (52%), Gaps = 35/319 (10%)

Query: 22  LNSYVMHILILSIMWTLAGMAWNLLGGYCGQVSFGHAAFFGMGAYSAGLIHLHLGLSPWW 81
           L  Y +  L   +++ + G+   LL G+ G  S GHAAF G+GAY+  ++ ++ G+    
Sbjct: 39  LPEYWLAQLTFVLIYAVVGLGLMLLAGFTGLFSLGHAAFLGVGAYTQAIM-VNAGIP--- 94

Query: 82  GFLVSLPLVALVALAMGSVV----LRLRGPYFVLATLAIGEVLRITCENLTDFTKGTLGI 137
            F ++L    L++ A+G VV    LR++G Y  +ATLA G ++          T G  G+
Sbjct: 95  -FPLALACAGLLSAAVGMVVGLPALRVKGIYLGMATLAFGFIVEEVIARWEHVTGGNAGL 153

Query: 138 MITRT----WV--EKTQYYYIILGLALLGFVVCRAIVHSRWGYYFVAIREDQDAAESMGI 191
           M+       W      ++Y++ L + +L  +    ++ S  G  FVAIR+ + +A+SMGI
Sbjct: 154 MVQYPTLFGWALDSTDEFYFLCLVVTVLATLGIVNLMRSSTGRAFVAIRDSEISAQSMGI 213

Query: 192 DTTRYKTIALTVSAMLTGLAGAFYTNYMGYIDPGVVFSLGEISILIIMVVMVGGVATEWG 251
              RYKT++  +SA L G+ GA Y + + ++ P   FS+ + SI ++++V++GG+ +  G
Sbjct: 214 QLARYKTLSFALSAALAGIGGALYAHKIQFLSP-EQFSIIQ-SIDLLLMVVIGGLGSIHG 271

Query: 252 PALGAGIMVILAEYIR----SLP-LIGVA---YQTMFGVLLIVIIIYLPNGLVGDW---- 299
             LGA  ++++ + I      LP  IG A      ++G++LI  +++ P GL G W    
Sbjct: 272 AFLGAIFLIVMPQLISLGKDFLPEAIGQAAGLQGAVYGIVLIAFVLFEPMGLYGRWLKVR 331

Query: 300 ------PVLRRKLLRRGAT 312
                 P  R+ L +R  T
Sbjct: 332 TWFQLFPFYRKGLFKRQKT 350