Pairwise Alignments

Query, 405 a.a., Extracellular ligand-binding receptor (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 378 a.a., Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  110 bits (274), Expect = 9e-29
 Identities = 105/397 (26%), Positives = 167/397 (42%), Gaps = 39/397 (9%)

Query: 22  ALLLGAGLPAATAQAADPVKIGAFFALSGPTAPVGTPTKLVAQMFVDKVNKEGGINGRPI 81
           A L    L    AQA   + IGA F+++GP A +G   +   Q+F  +      I G  I
Sbjct: 8   AALTTLALSGVGAQAE--IVIGASFSITGPAAALGIAPRNTIQLFPTE------IAGEKI 59

Query: 82  ELVLGDTEGDPTKAVLTFKRFVSEEKVVAVIGPTRTDEGMAVKRQIESSGIPTVMTVGGD 141
             V+ D   DPT A     R V+EEKV  +IG T +   +A+ +    S     + +   
Sbjct: 60  RYVVLDDATDPTNAARNAHRLVTEEKVDLIIGSTASPPAIAIAQVASES---QTVQLAAA 116

Query: 142 PVIMEGKLGNMDFGTARSVFKSPQRSSTAVRKVLGYLKKHELTKVALLLSGDNFGQDGER 201
           P+ +  + G          ++ PQ  S   +  + ++KK        L   D +G+   R
Sbjct: 117 PIDLPDERGQW-------TYRLPQSISLMAQGTIEHMKKSGAKTFGFLGYSDAYGESWLR 169

Query: 202 WLRSLAPEYGIEIVGTEQFKPTDVDMKTQLTALAGKGPQAVICWTIG-----PAGALVSK 256
            +     E G+++V  E+F   D  +  Q   +    P A++    G     P  ALV +
Sbjct: 170 EMTRYGNEAGLKLVSVERFGRADASVTAQALKVLSPNPDAMLVVASGSGAVMPQKALVDR 229

Query: 257 NHHALGLTMPLLQCHGLPDPAYIKLAGEASEGDLMPATKLMTWEALPDGDPQKKVIAEFV 316
           N+        + Q      P  +++ G+  EG L  +   +  + LPD  P K V  +FV
Sbjct: 230 NYKG-----RIYQTFSAVAPDLLRMGGKDVEGTLGLSGPAVGADQLPDSHPSKPVALDFV 284

Query: 317 RLYRDEYKYDAQYPLNTHSGYAWDALLLLVEAM------RKVGTEPAR--VRDALEATRG 368
           +LY  E K+ A    N  +   W A LLL +A+       K GT   R  ++ A+E T  
Sbjct: 285 KLY--EAKFGAG-SYNQFAANIWGAKLLLDKAIPVALKQAKPGTVEFRQALKKAIENTGE 341

Query: 369 LVGVSGVFTLGPQDHNGLGEDSMVMLQVRGGRFVMVE 405
           +V   GV      DH G    +  +L+ R G +V  +
Sbjct: 342 VVVPQGVLKYSAGDHYGYDHRARFVLKARNGVWVAAD 378