Pairwise Alignments

Query, 479 a.a., RNA methyltransferase, TrmA family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 431 a.a., 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  157 bits (396), Expect = 9e-43
 Identities = 137/466 (29%), Positives = 204/466 (43%), Gaps = 51/466 (10%)

Query: 11  LLELTVDALAAGGRAVCRHEGRVVFVAGGLPGQRVRARLTTVKRRFAEATLDAVLEPSPV 70
           ++ + V+ L + G+ V RH G+ +F+ G LP +     +T  K++FA A +   L  SP 
Sbjct: 16  IITVKVNDLDSFGQGVARHNGKALFIPGLLPEESAEVIITEDKKQFARARVSRRLNDSPE 75

Query: 71  QCAPFCAHFGDCGGCAWQDLPYAEQLRWKERFVVDALGRIGGLRDANVLPILASPAERGF 130
           +  P C HFG CGGC  Q +  A Q R K      AL R   L    V  I+A  A  G+
Sbjct: 76  RETPRCPHFGVCGGCQQQHVSIALQQRSKSA----ALAR---LMKHEVNDIIAG-APWGY 127

Query: 131 RNKMEFAFSQDRDGQLHLGLRRRASRAVVDITECHLQTPLTVRIVEAVRELARESGLPGW 190
           R +   + +   D  L +G R+  S  +V++ +C +  P    ++  +R       L   
Sbjct: 128 RRRARLSLNCPPDKPLQMGFRKAGSSDIVNVEQCPVLAPQLAALLPRIRAC-----LASL 182

Query: 191 DDSRQDGFWRFLVVREPELGRDAGADTPAEGEGQDTPGRQCLIQCITGRHPGAAQAVSRL 250
             +R  G    +          AG+ T                  +  RH     A  + 
Sbjct: 183 HGTRHLGHVELV---------QAGSGT-----------------LMILRHTAPLSAADK- 215

Query: 251 AEALRARFPEVTGVVHSLRLDPEQIAYGERVLAVDGEAVLTERLGGNDLLLGPDSFFQTN 310
            E L  RF    G+  SL L P    + E +  V GEA   +  G   L   P  F Q N
Sbjct: 216 -EKLE-RFSHSEGL--SLFLAP----FSEILETVSGEAPWYDSHGLR-LAFSPRDFIQVN 266

Query: 311 TAAAGLLYDEARRMAAAGPDDTVWDLYSGVGAIALHLARAAGAVRGFEITPEAVNDARAN 370
            A    +   A        +D V DL+ G+G   L LA  A +V G E  P  V   R N
Sbjct: 267 EAVNQQMVARALEWLDVRAEDRVLDLFCGMGNFTLPLATRAASVIGVEGVPALVEKGREN 326

Query: 371 AARNNILNCSFVSGDVRASLRRERPGEGVSPRIVVVDPPRAGLHEDVVEAVSAHQPERIV 430
           A RN + N +F   ++   + ++   +    + V++DP RAG    V+  +   +P RIV
Sbjct: 327 AIRNGLHNVTFFHENLEEDVTKQPWAKNGFDK-VLLDPARAGA-TGVMRHIIKLKPIRIV 384

Query: 431 YVSCNPATMARDAALFTARGYALQEARPVDLFPHSPHVECVALLTR 476
           YVSCNPAT+ARD+      GY +     +D+FPH+ H+E + L  R
Sbjct: 385 YVSCNPATLARDSEALVNAGYEVTRLAMLDMFPHTGHLESMVLFER 430