Pairwise Alignments

Query, 479 a.a., RNA methyltransferase, TrmA family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 467 a.a., 23S rRNA (uracil-5-)-methyltransferase RumA from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  276 bits (705), Expect = 1e-78
 Identities = 163/479 (34%), Positives = 250/479 (52%), Gaps = 37/479 (7%)

Query: 11  LLELTVDALAAGGRAVCRHEGRVVFVAGGLPGQRVRARLTTVKRRFAEATLDAVLEPSPV 70
           L  LT++ +A+ G+ +  ++G+VVFV    PG  V  R+   K  F E     + E S  
Sbjct: 10  LKNLTIERIASEGKCIAHYDGKVVFVQNVAPGDVVDVRIRRGKSSFMEGDAIHIHEYSKD 69

Query: 71  QCAPFCAHFGDCGGCAWQDLPYAEQLRWKERFVVDALGRIGGLRDANVLPILASPAERGF 130
           + APFC+HFG CGGC WQ + Y  Q+ +K + VVD   RI  +    VLPI+ S   + +
Sbjct: 70  RVAPFCSHFGVCGGCKWQHINYDLQMNYKRQQVVDQFQRIAKVPIPEVLPIIGSGDTQYY 129

Query: 131 RNKMEFAFSQDR--------------DGQLHLGLRRRASRAVVDITECHLQTPLTVRIVE 176
           RNK++F FS +R                 L   + +R  + +VD+  C+LQ  L+  +  
Sbjct: 130 RNKLDFTFSNNRWLTREQIDSGEEFERNALGFHIPKRFDK-IVDVDHCYLQGGLSNEVRN 188

Query: 177 AVRELARESGLPGWDDSRQDGFWRFLVVREPELGRDAGADTPAEGEGQDTPGRQCLIQCI 236
           A+RE A E+ L  +D  +Q+G  R L++R                    T     +I   
Sbjct: 189 ALREFALENSLTFFDMIKQNGLLRNLIIRTT------------------TTDETMVIVQF 230

Query: 237 TGRHPGAAQAVSRLAEALRARFPEVTGVVHSLRLDPEQIAYGERVLAVDGEAVLTERLGG 296
              HP   + + ++ + L  RFP +T +++ + L   +  + + +    G   + E + G
Sbjct: 231 GENHP---EQIEQVMDFLAGRFPSITSLLYIINLKKNETFHDQEIHTFMGRDYIIEEMEG 287

Query: 297 NDLLLGPDSFFQTNTAAAGLLYDEARRMAAAGPDDTVWDLYSGVGAIALHLARAAGAVRG 356
               +GP SF+QTN+  A  LY  AR  A+   ++ V+DLY+G G IA  +A+ A  V G
Sbjct: 288 LQFRIGPKSFYQTNSKQAYELYKVAREFASLQGNEVVYDLYTGTGTIANFIAKKAKQVIG 347

Query: 357 FEITPEAVNDARANAARNNILNCSFVSGDVRASLRRERPGEGVSPRIVVVDPPRAGLHED 416
            E   EA+ DA+ NA  N + N  F +GD++  L  E   +  +P +++ DPPRAG+HED
Sbjct: 348 IEYVEEAIEDAKLNAKENGLENTQFYAGDMKDMLTDEFIADHAAPDVIITDPPRAGMHED 407

Query: 417 VVEAVSAHQPERIVYVSCNPATMARDAALFTARGYALQEARPVDLFPHSPHVECVALLT 475
           VV  +      +IVY+SCNPAT ARD AL   + Y++   +PVD+FP + HVE V LLT
Sbjct: 408 VVNMLLKLAAPKIVYISCNPATQARDIALLGEK-YSVDIVQPVDMFPQTYHVENVVLLT 465