Pairwise Alignments

Query, 479 a.a., RNA methyltransferase, TrmA family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 375 a.a., 23S rRNA m(5)U747 methyltransferase, SAM-dependent from Escherichia coli BL21

 Score =  137 bits (345), Expect = 6e-37
 Identities = 112/407 (27%), Positives = 183/407 (44%), Gaps = 33/407 (8%)

Query: 70  VQCAPFCAHFGDCGGCAWQDLPYAEQLRWKERFVVDALGRIGGLRDANVLPILASPAERG 129
           +QCA + A  G C  C W   P  EQL  K   + + L       +    P+  S  E+G
Sbjct: 1   MQCALYDA--GRCRSCQWITQPIPEQLSAKTADLKNLLADFPV--EEWCAPV--SGPEQG 54

Query: 130 FRNKMEFAFSQDRDGQLHLGLRRRASRAVVDITECHLQTPLTVRIVEAVRELARESGLPG 189
           FRNK +   S   +  L LG+  R      D+ +C L       +  A++     +GL  
Sbjct: 55  FRNKAKMVVSGSVEKPL-LGMLHRDGTPE-DLCDCPLYPASFAPVFSALKPFIARAGLTP 112

Query: 190 WDDSRQDGFWRFLVVREPELGRDAGADTPAEGEGQDTPGRQCLIQCITGRHPGAAQAVSR 249
           ++ +R+ G  +++++ E +   D G                 +++ +       AQ + +
Sbjct: 113 YNVARKRGELKYILLTESQ--SDGGM----------------MLRFVLRSETKLAQ-LRK 153

Query: 250 LAEALRARFPEVTGVVHSLRLDPEQIAYGERVLAVDGEAVLTERLGGNDLLLGPDSFFQT 309
               L+ + P++  +  +++     I  GE  + +  +  L ER     L + P SFFQT
Sbjct: 154 ALPWLQEQLPQLKVITVNIQPVHMAIMEGETEIYLTEQQALAERFNDVPLWVRPQSFFQT 213

Query: 310 NTAAAGLLYDEARRMAAAGPDDTVWDLYSGVGAIALHLARAAGAVRGFEITPEAVNDARA 369
           N A A  LY  AR      P   +WDL+ GVG   LH A     + G EI PEA+  A+ 
Sbjct: 214 NPAVASQLYATARDWVRQLPVKHMWDLFCGVGGFGLHCATPDMQLTGIEIAPEAIACAKQ 273

Query: 370 NAARNNILNCSFVSGDVRASLRRERPGEGVSPRIVVVDPPRAGLHEDVVEAVSAHQPERI 429
           +AA   +    F + D      +    +G  P +V+V+PPR G+ + + + +S   P  I
Sbjct: 274 SAAELGLTRLQFQALD----STQFATAQGEVPELVLVNPPRRGIGKPLCDYLSTMAPRFI 329

Query: 430 VYVSCNPATMARDAALFTARGYALQEARPVDLFPHSPHVECVALLTR 476
           +Y SCN  TMA+D       GY ++  +  D+FPH+ H E + LL +
Sbjct: 330 IYSSCNAQTMAKDVR--ELPGYRIERVQLFDMFPHTAHYEVLTLLVK 374