Pairwise Alignments

Query, 811 a.a., methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 712 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  178 bits (452), Expect = 8e-49
 Identities = 103/279 (36%), Positives = 162/279 (58%)

Query: 531 RMKQVNAELVSVAGQVADATGAIESQTEGVMRGTENQRGLITESVTAIEQMNATIMEVAR 590
           +++ +  ++VS   +V+D++           +G   Q   I +  TA+ +M AT  +VAR
Sbjct: 429 KLQGMITQVVSSVQKVSDSSEHTADIAIRTNQGVHKQMVEIDQVATAVHEMTATAQDVAR 488

Query: 591 SAANASRQADSGQARAQEGARVVDEAVTAIGQVSSLTGVLRGNLGELGRQAEGIGQIMNV 650
           +A  A++ A      A +G R+V +  T+IG ++   G     +  L + +E I  I+  
Sbjct: 489 NATQAAQAASHADQAASQGMRIVRDTSTSIGALAEEIGKAVSVVQTLAKDSENINAILTA 548

Query: 651 ISDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMNATQEVRRSIETIQSG 710
           I  IA+QTNLLALNAAIEAARAG+ GRGFAVVADEVR LA+KT  AT+E++  I+ +Q G
Sbjct: 549 IRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTQKATEEIQTMIQQLQQG 608

Query: 711 AARNIASMEEVAGAVDNATSLAGRSGEALREIVALVNDTSAQVTSIATAAEEQSAASEEI 770
               +  ME+     D +   A ++ EAL  I   V+  +   T IA+AAEEQSA +E+I
Sbjct: 609 TRDVVRVMEDSQSRTDESVQHAAKAAEALETITQAVSVINDMNTQIASAAEEQSAVAEDI 668

Query: 771 TRSVSQVSELSDDTAHRMEEAARAINDLGALAARLREIV 809
            R+V  + +++++ A   +E++ A  DL  LA + R ++
Sbjct: 669 NRNVINIGQVANEVAGGADESSAASADLTKLAEQQRRLI 707



 Score = 50.4 bits (119), Expect = 3e-10
 Identities = 67/359 (18%), Positives = 134/359 (37%), Gaps = 50/359 (13%)

Query: 325 MLGALLALLAVPGVVFSV--LVSRFVTTPVSRVVSLIRDITEDRANLNDRLNDAGRDEIS 382
           + G  +A L + G+   V  LV   +  P+ ++V+++ DI +   +L  RL     DE+ 
Sbjct: 358 IFGMTIAGLLIAGIGLLVIWLVGHGIARPLKQMVAMLNDIAQGEGDLTRRLTSDRADELG 417

Query: 383 QLARWFN----RLMGKIEDILCSVEGYKNVVNAIPDPVFAVDDDYNIILANTAVARIAGA 438
            +A  FN    +L G I  ++ SV+   +      D   A+  +  +      + ++A A
Sbjct: 418 AIANGFNTFLIKLQGMITQVVSSVQKVSDSSEHTAD--IAIRTNQGVHKQMVEIDQVATA 475

Query: 439 DDGEKVRGRKCSSIFNASICGTSKCPINQAMQRGGRYEADIVELNILGQTRFVRPYGDIV 498
                   +  +   NA+    +    +QA  +G R                      IV
Sbjct: 476 VHEMTATAQDVAR--NATQAAQAASHADQAASQGMR----------------------IV 511

Query: 499 RDCHGNKAGYLE----VASDVSELVMKERDLHAHMERMKQVNAELVSVAGQVADATGAIE 554
           RD   +     E      S V  L     +++A +  ++ +  +   +A   A       
Sbjct: 512 RDTSTSIGALAEEIGKAVSVVQTLAKDSENINAILTAIRGIAEQTNLLALNAAIEAARAG 571

Query: 555 SQTEGVMRGTENQRGLITESVTAIEQMNATIMEVARSAANASRQADSGQARAQEGARVVD 614
            Q  G     +  R L  ++  A E++   I ++ +   +  R  +  Q+R  E  +   
Sbjct: 572 EQGRGFAVVADEVRNLAQKTQKATEEIQTMIQQLQQGTRDVVRVMEDSQSRTDESVQHAA 631

Query: 615 EAVTAIGQVSSLTGVLRGNLGELGRQAE--------------GIGQIMNVISDIADQTN 659
           +A  A+  ++    V+     ++   AE               IGQ+ N ++  AD+++
Sbjct: 632 KAAEALETITQAVSVINDMNTQIASAAEEQSAVAEDINRNVINIGQVANEVAGGADESS 690