Pairwise Alignments

Query, 811 a.a., methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 963 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  209 bits (531), Expect = 8e-58
 Identities = 120/282 (42%), Positives = 171/282 (60%)

Query: 529 MERMKQVNAELVSVAGQVADATGAIESQTEGVMRGTENQRGLITESVTAIEQMNATIMEV 588
           M+RM     +  +V+  V+ +   +  Q   V  G + QR  + E+  A+  M  T+  V
Sbjct: 532 MDRMTGAAGKTRNVSEHVSHSIADLTGQVSTVTGGVQTQRRRMDETAEAVADMRVTVANV 591

Query: 589 ARSAANASRQADSGQARAQEGARVVDEAVTAIGQVSSLTGVLRGNLGELGRQAEGIGQIM 648
             +A  A+ QAD  +  A EGAR + E V AI  +      L   +  LG +AE IGQ+M
Sbjct: 592 THNARRAAEQADLSRGNADEGARGMRETVAAINGIRERIQRLNEAMARLGVEAENIGQVM 651

Query: 649 NVISDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMNATQEVRRSIETIQ 708
           ++ISDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTM AT++V  ++  IQ
Sbjct: 652 SLISDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMAATRDVGEAVARIQ 711

Query: 709 SGAARNIASMEEVAGAVDNATSLAGRSGEALREIVALVNDTSAQVTSIATAAEEQSAASE 768
           S    NIA++E+ A     + + A  +G+A+  IV LV++T+  V SIA A  +Q+ ASE
Sbjct: 712 SHTRDNIAAVEQAARDATASAASAEAAGQAMTRIVTLVDETAGMVQSIAAANGQQAVASE 771

Query: 769 EITRSVSQVSELSDDTAHRMEEAARAINDLGALAARLREIVQ 810
            + RSV +V+ ++  TA  M+     ++D+ A    +  +V+
Sbjct: 772 VVGRSVDEVNRIAGQTAEAMDRFTGTLSDIFAQVQEMFSMVE 813



 Score = 32.0 bits (71), Expect = 2e-04
 Identities = 62/276 (22%), Positives = 109/276 (39%), Gaps = 36/276 (13%)

Query: 465 INQAMQRGGRYEADIVEL-----NILGQTRFVRPYGDIVRDCHGNKA-GYLEVASDVSEL 518
           +N+AM R G    +I ++     +I  QT  +     I     G+   G+  VA +V +L
Sbjct: 633 LNEAMARLGVEAENIGQVMSLISDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKL 692

Query: 519 VMKE----RDLHAHMERMKQVNAELVSVAGQVA-DATGAIESQTEGVMRGTENQRGLITE 573
             K     RD+   + R++    + ++   Q A DAT +  S         E     +T 
Sbjct: 693 AEKTMAATRDVGEAVARIQSHTRDNIAAVEQAARDATASAAS--------AEAAGQAMTR 744

Query: 574 SVTAIEQMNATIMEVARSAANASRQADSGQARAQEGARVVDEAVTAIGQVSSLTGVLRGN 633
            VT +++    +  +A  AAN  +   S     +   R VDE     GQ +       G 
Sbjct: 745 IVTLVDETAGMVQSIA--AANGQQAVAS-----EVVGRSVDEVNRIAGQTAEAMDRFTGT 797

Query: 634 LGELGRQAEGIGQIMNVISDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKT 693
           L ++  Q + +  ++ VI    D   L+A  +     R  D       +  + +KL +  
Sbjct: 798 LSDIFAQVQEMFSMVEVICAGEDGVALMADASDETLVRWTDELSNLPSIDAQHKKLVD-Y 856

Query: 694 MNATQEVRRSIETIQSGAARNIASMEEVAGAVDNAT 729
           +NA     RS          ++A++ EV G + + T
Sbjct: 857 INAVHRAARS---------NDMAAVLEVFGQLKSYT 883



 Score = 30.4 bits (67), Expect = 5e-04
 Identities = 54/250 (21%), Positives = 95/250 (38%), Gaps = 35/250 (14%)

Query: 583 ATIMEVARSAANASRQADSGQARAQEGARVVDEAVTAIGQVSSLTGVLRGNLGELGR-QA 641
           A +M+   +    + +   G  R  EG  V+     A  Q   + G+  G + E+   +A
Sbjct: 350 ADVMDTEAARKAVAGETGCGAVRDHEGRPVL-----AAWQPLRIEGLTLGLVAEIDMDEA 404

Query: 642 EGIGQIMNVISDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKL----------AE 691
               + +   S  A+++ L      +    A  +G   A+VA   R L          AE
Sbjct: 405 LAATRDIAAASGKAERSMLTGALVVLLLGAALGSGVAVALVASISRPLRRLQAYAGEVAE 464

Query: 692 KTMNATQE---------VRRSIETIQSGAARNIASMEEVAGAVDNATSLAGRSGEALREI 742
             + A  E         +R SIE +     + I   EE       A  +A  + +A+R  
Sbjct: 465 GHLEARPEGAYPPELDDMRHSIERMVQNLRQRI---EEADAQRQEAARMAREAHDAMRNA 521

Query: 743 VALVNDTSAQVTSIATAAEEQSAASEEITRSVS----QVSELS---DDTAHRMEEAARAI 795
            A  +     +  +  AA +    SE ++ S++    QVS ++        RM+E A A+
Sbjct: 522 TASESRIKRLMDRMTGAAGKTRNVSEHVSHSIADLTGQVSTVTGGVQTQRRRMDETAEAV 581

Query: 796 NDLGALAARL 805
            D+    A +
Sbjct: 582 ADMRVTVANV 591