Pairwise Alignments

Query, 452 a.a., two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 459 a.a., two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  321 bits (823), Expect = 3e-92
 Identities = 182/455 (40%), Positives = 276/455 (60%), Gaps = 9/455 (1%)

Query: 3   KHSVLLVEDELSMLLGMQHALSQAGYEVATAGDAEKAQQLLRQRPFDLVITDLRLPGMNG 62
           K  +L+++DE + LL ++  L+ AGY V    D E     L +   D+++TD+++P + G
Sbjct: 4   KTHLLVLDDEKNYLLVLEALLTDAGYTVTALNDPETGLAFLEESEVDVIVTDMKMPKITG 63

Query: 63  MELLEGICELYPGTGVILITAFPEVELAVQAIKAGAFDFLCKPFPRDGLLIAVERYFRFL 122
            E+LE + + +P   V+++TAF  +E AV+ +K GAFD++ KPF  D LL++V       
Sbjct: 64  REVLEQVKKNWPHIPVLIMTAFGSIESAVEVMKYGAFDYITKPFSNDELLLSVHNAAELS 123

Query: 123 DLKRENARLRGERDDG----EFIGESPMMLKVFERIRAIAGSCVPVLVLGPSGSGKELVA 178
            + R+   LR   ++     + IG+S  + +    +   A S   VL+ G SG+GKELVA
Sbjct: 124 RMHRQYRVLRENLEERYGMHQIIGKSRAIRETLGMVDRAAPSRSTVLISGESGTGKELVA 183

Query: 179 GALHRLSKRRDKPFIKINCAALPEHLLESELFGHEKGAFTGAQQARKGKFEAADGGTLFF 238
            A+H  S R   PF+ +NC AL   +LESELFGHEKG+FTGA   R+G+FE A GGTLF 
Sbjct: 184 RAIHFSSPRNKGPFVSVNCMALNPGVLESELFGHEKGSFTGAVAMRRGRFEQAGGGTLFL 243

Query: 239 DEAGEMPLAVQAKLLRVLEDQEVTPVGGNMPRKVDVRTVFATARDLEEAIGAGTFREDLY 298
           DE GE+   +Q KLLRVL+++    VGG    +VD+R V AT ++L+E +  G FREDL+
Sbjct: 244 DEIGELTPELQVKLLRVLQERRFERVGGTEEVEVDIRIVAATNKNLQEEVEKGNFREDLF 303

Query: 299 YRINVVPVTLPPLRERGGDVALLAERFLRRFCAQHD-RQVTFSEQARNALLAYDYPGNVR 357
           YR+NVV + LPPLRER  D+ LL   F+ +   ++     TF+ +A + +  Y++PGN+R
Sbjct: 304 YRLNVVHIALPPLRERREDIHLLVAHFVDKLARENGVTPKTFTPEALDYMTGYEWPGNIR 363

Query: 358 ELRNAIERAVILCAEDKIHVGHLPKRIRDATQASQEQQPEETRFVQ--LADGVAQFEKKR 415
           +L+N +ER ++L + D I V  LP  +RD  + SQ +   +   VQ  LAD + + E   
Sbjct: 364 QLQNVVERCLVLVSGDTIRVDDLPPELRD--EESQLKSAVDLLPVQLDLADTLERIEAAL 421

Query: 416 ILEALQKTGGRRIRAAELLGITRKQLWLKLKELDI 450
           I  AL +    +++AAELL I++  L  KLK+ +I
Sbjct: 422 IRRALVRADFVQVKAAELLAISKSLLQYKLKKYNI 456