Pairwise Alignments

Query, 452 a.a., two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 441 a.a., sigma-54-dependent response regulator transcription factor ZraR from Escherichia coli ECRC102

 Score =  334 bits (856), Expect = 4e-96
 Identities = 194/444 (43%), Positives = 267/444 (60%), Gaps = 16/444 (3%)

Query: 6   VLLVEDELSMLLGMQHALSQAGYEVATAGDAEKAQQLLRQRPFDLVITDLRLPGMNGMEL 65
           +L+V+D++S    +Q  L   GY VA A    +A + +R+R FDLV+ D+R+  M+G+  
Sbjct: 8   ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVRERVFDLVLCDVRMAEMDGIAT 67

Query: 66  LEGICELYPGTGVILITAFPEVELAVQAIKAGAFDFLCKPFPRDGLLIAVERYFRFLDLK 125
           L+ I  L P   V+++TA+  VE AV+A+K GA D+L KP   D L   +E+      + 
Sbjct: 68  LKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKALAHTHII 127

Query: 126 RENARLRGERDDGEFIGESPMMLKVFERIRAIAGSCVPVLVLGPSGSGKELVAGALHRLS 185
                       G  +G+SP M  +   I  +A S   VL+ G SG+GKELVA A+H  S
Sbjct: 128 DAETPAVTASQFG-MVGKSPAMQHLLSEIALVAPSEATVLIHGDSGTGKELVARAIHASS 186

Query: 186 KRRDKPFIKINCAALPEHLLESELFGHEKGAFTGAQQARKGKFEAADGGTLFFDEAGEMP 245
            R +KP + +NCAAL E LLESELFGHEKGAFTGA + R+G+F  ADGGTLF DE G++ 
Sbjct: 187 ARSEKPLVTLNCAALNESLLESELFGHEKGAFTGADKRREGRFVEADGGTLFLDEIGDIS 246

Query: 246 LAVQAKLLRVLEDQEVTPVGGNMPRKVDVRTVFATARDLEEAIGAGTFREDLYYRINVVP 305
             +  +LLR ++++EV  VG N    VDVR + AT RDL   + AG FR+DLYYR+NVV 
Sbjct: 247 PMMLVRLLRAIQEREVQRVGSNQTISVDVRLIAATHRDLAAEVNAGRFRQDLYYRLNVVA 306

Query: 306 VTLPPLRERGGDVALLAERFLRRFCAQHDRQVT-FSEQARNALLAYDYPGNVRELRNAIE 364
           + +P LR+R  D+ LLA  FL+RF  ++ + V  F+ QA + L+ YD+PGN+REL NA+E
Sbjct: 307 IEVPSLRQRREDIPLLAGHFLQRFAERNRKAVKGFTPQAMDLLIHYDWPGNIRELENAVE 366

Query: 365 RAVILCAEDKIHVGHLPKRIRDA---TQASQEQQPEETRFVQLADGVAQFEKKRILEALQ 421
           RAV+L   + I    LP  I         S + QP           + + EK+ IL AL+
Sbjct: 367 RAVVLLTGEYISERELPLAIASTPIPLAQSLDIQP-----------LVEVEKEVILAALE 415

Query: 422 KTGGRRIRAAELLGITRKQLWLKL 445
           KTGG +  AA  LGITRK L  KL
Sbjct: 416 KTGGNKTEAARQLGITRKTLLAKL 439