Pairwise Alignments

Query, 452 a.a., two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 445 a.a., two-component system response regulator GlrR from Dickeya dadantii 3937

 Score =  312 bits (800), Expect = 1e-89
 Identities = 191/448 (42%), Positives = 264/448 (58%), Gaps = 19/448 (4%)

Query: 5   SVLLVEDELSMLLGMQHALSQAGYEVATAGDAEKAQQLLRQRPFDLVITDLRLPGMNGME 64
           S+LLV+D+ S+L  +   L+  G+ V TA + + A +LL++   DLVI+DLR+  M+G+ 
Sbjct: 8   SLLLVDDDPSLLKLLGMRLTSEGFTVTTATNGQDALRLLQREKIDLVISDLRMDEMDGLA 67

Query: 65  LLEGICELYPGTGVILITAFPEVELAVQAIKAGAFDFLCKPFPRDGLLIAVERYFRFLDL 124
           L   I +  PG  VI++TA   +  AV A + G F FL KP  RD L  A++      D 
Sbjct: 68  LFAEIQKNQPGMPVIILTAHGSIPEAVAATQQGVFSFLTKPVDRDALYKAID------DA 121

Query: 125 KRENARLRGERDDGEFIGESPMMLKVFERIRAIAGSCVPVLVLGPSGSGKELVAGALHRL 184
            + +     E      +  SP+ML++ E+ + +A S V VL+ G SG+GKE++A A+H  
Sbjct: 122 LKLSPPASDESWRAAVVTRSPIMLRLLEQAKMVAQSDVSVLINGQSGTGKEVLAQAIHAA 181

Query: 185 SKRRDKPFIKINCAALPEHLLESELFGHEKGAFTGAQQARKGKFEAADGGTLFFDEAGEM 244
           S R  +PFI INC ALPE LLESELFGH +GAFTGA   R+G F+AA+GGTLF DE G+M
Sbjct: 182 SPRAGRPFIAINCGALPEPLLESELFGHARGAFTGAVSQREGLFQAAEGGTLFLDEIGDM 241

Query: 245 PLAVQAKLLRVLEDQEVTPVGGNMPRKVDVRTVFATARDLEEAIGAGTFREDLYYRINVV 304
           PLA+Q KLLRVL+++++ P+G N    ++VR + AT RDL +A+  G FREDLYYR+NVV
Sbjct: 242 PLALQVKLLRVLQERKIRPLGSNRDIDINVRIISATHRDLPKAMEKGEFREDLYYRLNVV 301

Query: 305 PVTLPPLRERGGDVALLAERFLRRFCAQHDRQV-TFSEQARNALLAYDYPGNVRELRNAI 363
            + LP L ER  D+ LLA   LR   A+H   V +FS  A   L+A  +PGNVR+L N I
Sbjct: 302 NLKLPALNERAEDIPLLANHLLREAAARHKPFVRSFSTDAMKRLMAASWPGNVRQLVNVI 361

Query: 364 ERAVILCAEDKIHVGHLPKRIRDATQASQEQQPEETRFVQLADGVAQFEKKRILEALQKT 423
           E+ V L +            I DA    Q  + E T     A+   QFE   + + LQ  
Sbjct: 362 EQCVALTSAPV---------IGDAL-VEQALEGENTALPTFAEARNQFELNYLRKLLQIA 411

Query: 424 GGRRIRAAELLGITRKQLW--LKLKELD 449
            G   +AA + G  R + +  L   ELD
Sbjct: 412 KGNVTQAARMAGRNRTEFYKLLARHELD 439