Pairwise Alignments

Query, 1008 a.a., formate dehydrogenase, alpha subunit (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 970 a.a., Periplasmic nitrate reductase from Azospirillum sp. SherDot2

 Score =  232 bits (591), Expect = 1e-64
 Identities = 198/656 (30%), Positives = 291/656 (44%), Gaps = 116/656 (17%)

Query: 3   VNRRQFLKLSAGATLASAFGGLGISLAPSVARAELQKLQWAKQTTS---VCCYCAVGCGL 59
           V+RR FL+ S  A  A     +G      + +AE   +    +  +   VC +C+VGC +
Sbjct: 30  VSRRGFLRRSGLA--AGGIAAVGALPGAMIRKAEAGPILPNVEVVTRKNVCTHCSVGCTV 87

Query: 60  IVHTAKNGEGRAVNVEGDPDHPINEGSLCPKGASIFQLGENNARSPKPLYRGPNSGEWKE 119
           I   A+   G  V  E   + PIN+G+ C KGAS+ +L +   R   PL      G W+ 
Sbjct: 88  I---AEVQNGVWVGQEPGWESPINQGTHCAKGASVRELTKGTRRVKYPLKLV--DGVWQR 142

Query: 120 VEWDWALTEIAKRVKKTRDESFQLANAAGEKVNRTEAIASFGSAAMDNEECWAYQVILRS 179
           + WD A+ EI  ++   R            K +  +A+   GSA   NE  + Y+ +   
Sbjct: 143 IGWDQAIEEIGNQLMDIR------------KASGPDAVFWLGSAKFSNEGAYLYRKLAAF 190

Query: 180 LGLVFIEHQARIUHSPTVPALAESFGRGAMTNHWNDLANSDCVLIMGSNAAENHPISFKW 239
            G   ++HQARI HS TV  +A ++G GAMTN +ND+ NS  ++I+G N AE HP+S + 
Sbjct: 191 WGTNNVDHQARICHSTTVAGVANTWGYGAMTNSYNDIQNSKALVIVGGNPAEAHPVSMQH 250

Query: 240 VLRAQDKG-ATLIHVDPRFTRTSAKCDIYAPIRSGADIPFLGGLIKYILENKLYFEEYVR 298
           +LR ++   A  I +DPRFTRT+A    Y  IR G DIP   GL+ +I EN    +EY+R
Sbjct: 251 MLRGKEHNRAPFIVIDPRFTRTAAHATEYVRIRPGTDIPVAWGLLWHIFENGWEDKEYIR 310

Query: 299 EYTNASLIVGEKFSFKDGLFSGYDADKRKYDKSQWAFELDENGVPRRDPSLKHPRCVFNL 358
                                            Q  + +DE                   
Sbjct: 311 ---------------------------------QRVYGMDE------------------- 318

Query: 359 MKKHYERYTVDKVADITGTPKDLILKVYKAYAATGKPDKAGTIMYAMGWTQHSVGVQNIR 418
           ++   +++T ++V  +TG P   + +V +A A     +K  T+++ MG TQH+VG  N+R
Sbjct: 319 IRAEVKKWTPEEVERVTGAPGSQLRRVAEALA----KNKPSTVIWCMGVTQHTVGTANVR 374

Query: 419 AMAMIQLLLGNIGVAGGGVNALRGESNVQGSTDQGLLAHIWPAYNPAPNSKQTTLDAYNA 478
           A++++QL LGNIGVAGGG N  RG  NVQG+TD GL     PAY             Y  
Sbjct: 375 ALSILQLALGNIGVAGGGANIYRGHCNVQGATDFGLDVSTLPAY-------------YGL 421

Query: 479 ATPQSKDPMSVNWWQNRPKYVASYLKALYPDLAPADAYDIMPRLDA--SKPATYYFWLNI 536
           A    K       W     Y+    +    DL  A         DA  +KP         
Sbjct: 422 AEGAWKH--FARAWDVEYDYLKG--RFATKDLMEAKGIPTTRWFDAVLAKPGE------- 470

Query: 537 FDKMDKGDVKGCFAWGMNPACGGANANKNRRALGKLDWLVNVNIFENETSSFWKGPGMKP 596
            D+        CF  G N         +  + L KL  LV   I +   ++F     +K 
Sbjct: 471 IDQPSPLRAMMCFGHGGNTV---TRMPEMVKGLEKLSLLV---IADPHPTTF---AAIKE 521

Query: 597 EEIGTEVFFLPCAVSIEKEGSVANSGRWMQWRYRGPKPWGQTKPDGDIMLEMMHKI 652
              GT  + LP     E +GS   S R MQW  +  +P  ++K D  I+  +  K+
Sbjct: 522 RRNGT--YILPACTQFETDGSRTCSNRSMQWGEKVVEPIFESKDDYTIIYLLARKL 575



 Score = 44.3 bits (103), Expect = 4e-08
 Identities = 54/190 (28%), Positives = 79/190 (41%), Gaps = 39/190 (20%)

Query: 835 PFPEHYEPLECP----VSKNPFSK--------QLHNPVAFKIEGEKAAVCDPKFPFIGTT 882
           P P H EP+  P    V   P  +        QL   + FK+          +FP + T+
Sbjct: 783 PVPVHREPIYSPRPDLVKAFPAIEDRRDFRLVQLARSLQFKVADSDLR---QRFPMVLTS 839

Query: 883 YRVTEHWQTGLMTRRCAWLVEAEPEIFAEVSKELAKLRGIKNGDRVKVSSLRGSLEA--V 940
            R+ E+   G  TR   WL E +  +FAE++   A+  GI++G  V V       +A   
Sbjct: 840 GRLVEYEGGGEETRSNPWLAELQQSMFAEINTRDAERLGIRDGAWVWVYGPEDGSKAKVK 899

Query: 941 AIVTERIKPYKVMGAEIHMVGLPWHYG--WM-------VPRNG-----GDTANLLTPSAG 986
           A+VT+R     V G  + M   P+H+   W         P N      G+  N +T    
Sbjct: 900 ALVTDR-----VGGGTVFM---PFHFSGFWQGESLRGNYPPNTDPIVLGEPVNGVTTYGY 951

Query: 987 DPNTGIPETK 996
           DP T + ETK
Sbjct: 952 DPVTFMQETK 961