Pairwise Alignments

Query, 229 a.a., transcriptional regulator, Crp/Fnr family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 246 a.a., cAMP-binding protein from Magnetospirillum magneticum AMB-1

 Score =  105 bits (263), Expect = 6e-28
 Identities = 78/225 (34%), Positives = 109/225 (48%), Gaps = 8/225 (3%)

Query: 9   IERLPLFDGLSDPQLEGLAGIVVDRRVDK---GQMIFFESSPAEGFYVVAEGRVKIFKTA 65
           + RLPLF  L       LA I  D  V K     +IF +  P +   VV +G+V +  T 
Sbjct: 26  VARLPLFSDLGPTV---LAEITTDASVVKYARNDIIFRQGDPPDALRVVLDGQVGLTGTV 82

Query: 66  PDGREAVMHVMGPGETFGEVAVFQGGTFPAHAMAVENARVLFLPRKGLVDRITRDPTLAM 125
            DG E ++ ++  GE F   AV     F   A+A+  AR+L LP +     +   P LA 
Sbjct: 83  ADGGETMVEILKSGEVFIPAAVLTQKPFLMSAVALTPARILALPGERFRRDVREKPDLAY 142

Query: 126 NMLAALSRKLRVFTTKVESLTLHETPQRLAAYLLHASELKGDADTFRLDMAKGVLAGMLG 185
            ML +LSR  R    +V+ L L    QRLA YL+  +  +  +   RL  +K V+A  +G
Sbjct: 143 VMLTSLSRHFRTLVREVKDLKLKSAAQRLALYLIGLTARREGSTIVRLPHSKSVIAARVG 202

Query: 186 TARETLSRCLGKLAERGAVSVDGREVTIVDRDYLQALA-DGDETL 229
              ETLSR    L   G V VDG  V+I D   L+A   +G+E +
Sbjct: 203 VRPETLSRAFSHLKGHGVV-VDGNAVSIADIPALRAYCHEGEEII 246