Pairwise Alignments

Query, 155 a.a., protein of unknown function DUF163 (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 156 a.a., 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH from Serratia liquefaciens MT49

 Score = 66.2 bits (160), Expect = 2e-16
 Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 23/163 (14%)

Query: 4   LRLLAVGKLKTPFWQQAA-AHYLERLRHT--WRVTETLVRDGDAALPPAKR--NAD---- 54
           L+L+AVG  K P W Q     YL R      + +TE         +P  KR  NAD    
Sbjct: 3   LQLVAVGT-KMPDWVQTGFMDYLHRFPKDMPFELTE---------IPAGKRGKNADIKRI 52

Query: 55  ---EGARLLAALGPADIVVCMDERGKAYTSREFAALLDRLTENATAVPCFVIGGAYGLDD 111
              EG ++LAA+G  + +V +D  G  + + + A  L+R  ++   V   +IGG  GL  
Sbjct: 53  LEKEGEQMLAAVGKGNRIVTLDIPGTPWETPQLAQQLERWKQDGRNVS-LLIGGPEGLAP 111

Query: 112 AVLKRATLRVCLGPMTFPHEMARVVLLEQLYRADCILRRSPYH 154
           A    A     L P+T PH + RV++ E LYRA  I    PYH
Sbjct: 112 ACKAAAEQSWSLSPLTLPHPLVRVLVAESLYRAWSITTNHPYH 154