Pairwise Alignments

Query, 155 a.a., protein of unknown function DUF163 (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 156 a.a., 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH from Dickeya dianthicola ME23

 Score = 62.0 bits (149), Expect = 4e-15
 Identities = 54/161 (33%), Positives = 75/161 (46%), Gaps = 19/161 (11%)

Query: 4   LRLLAVGKLKTPFWQQAA-AHYLERLRHTWRVTETLVRDGDAALPPAKR--NAD------ 54
           L+L+AVG  K P W Q     YL R      +   LV      +P  KR  NAD      
Sbjct: 3   LQLVAVGT-KMPDWVQTGFTDYLRRFPKD--MPFELVE-----IPAGKRGKNADIKRILE 54

Query: 55  -EGARLLAALGPADIVVCMDERGKAYTSREFAALLDRLTENATAVPCFVIGGAYGLDDAV 113
            EG  +LAA+G  + +V +D  G  + + + A  L+R  ++   +   +IGG  GL    
Sbjct: 55  REGELMLAAVGKGNRIVTLDIPGSRWETPQLAQQLERWKQDGRDIS-LLIGGPEGLAPQC 113

Query: 114 LKRATLRVCLGPMTFPHEMARVVLLEQLYRADCILRRSPYH 154
              A     L P+T PH + RV++ E LYRA  I    PYH
Sbjct: 114 KAAAEQSWSLSPLTLPHPLVRVLVAESLYRAWSITTNHPYH 154