Pairwise Alignments

Query, 286 a.a., protein of unknown function DUF6 transmembrane (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 300 a.a., Predicted membrane protein from Kangiella aquimarina DSM 16071

 Score = 47.0 bits (110), Expect = 5e-10
 Identities = 24/73 (32%), Positives = 38/73 (52%)

Query: 52  RDWGVLFLQAAAGSLLFNVLLLAGVARLDAAAAGVVTSTTPAVMALASLVLLRERPGPRT 111
           RDW +L + +  G+ +  +L L+G    DA  A V+  T+   + L + + L+E    R 
Sbjct: 219 RDWRILIIASVLGTYISMILWLSGYKYTDAIIASVLNETSVLFIVLFAWIFLKEEVSRRR 278

Query: 112 LAGIACCVAGVLV 124
           LAG+     GVLV
Sbjct: 279 LAGVVLAFLGVLV 291



 Score = 46.6 bits (109), Expect = 7e-10
 Identities = 38/142 (26%), Positives = 60/142 (42%), Gaps = 11/142 (7%)

Query: 149 GVGLLLVLG-AVCCETLFLLLGRTLRTPVSPLAASTACTLFGAVQFLPLALPQAH----- 202
           G+G L  L  A+C  T  +L   +  T      +++A  LF  +    L +P A      
Sbjct: 4   GLGELFALSSAICWATAIILFKHSGET-----LSASALNLFKNILATFLLVPTAFFIEGI 58

Query: 203 RVAELDVTGWLLVGYYGAVITVAAYIFWFRGVARVSAGTAGAFTSVLPVSALAFSALLLG 262
           ++ +LD   W +V   G V    +  ++F  + +V AG     +S+     +  S L L 
Sbjct: 59  QLPQLDAYQWTIVAISGFVGIALSDTWYFLALRKVGAGNTAIVSSLYSPFVIVLSVLFLN 118

Query: 263 EPVGWAHLAGVACVLCGIWCVT 284
           E + W    G   VL GI  VT
Sbjct: 119 ETLHWTQFIGFLMVLIGIILVT 140



 Score = 39.3 bits (90), Expect = 1e-07
 Identities = 54/274 (19%), Positives = 103/274 (37%), Gaps = 24/274 (8%)

Query: 17  TLPSHLVQELRFLVAACIAVPLLYRREG-GLPRLPARDWGVLFLQAAAGSLLFNVLLLAG 75
           TL +  +   + ++A  + VP  +  EG  LP+L A  W ++ +    G  L +      
Sbjct: 30  TLSASALNLFKNILATFLLVPTAFFIEGIQLPQLDAYQWTIVAISGFVGIALSDTWYFLA 89

Query: 76  VARLDAAAAGVVTSTTPAVMALASLVLLRERPGPRTLAGIACCVAGVLVLRL-------- 127
           + ++ A    +V+S     + + S++ L E        G    + G++++          
Sbjct: 90  LRKVGAGNTAIVSSLYSPFVIVLSVLFLNETLHWTQFIGFLMVLIGIILVTWQRNRKNVD 149

Query: 128 APVPGAAGGDAALSLTASGADGVGLLLVLGAVCCETLFLLLGRTLRTPVSPLAASTACTL 187
           APV        AL+  A   + VG+++V   +  +  F ++   L              +
Sbjct: 150 APV---LWQGLALAAGAVFLNAVGVVMVKRILEGDGFFWIISLRL-----------IGGI 195

Query: 188 FGAVQFLPLALPQAHRVAEL-DVTGWLLVGYYGAVITVAAYIFWFRGVARVSAGTAGAFT 246
            G++  L ++      V EL     W ++     + T  + I W  G     A  A    
Sbjct: 196 LGSIGLLLISQKLIKVVNELKQPRDWRILIIASVLGTYISMILWLSGYKYTDAIIASVLN 255

Query: 247 SVLPVSALAFSALLLGEPVGWAHLAGVACVLCGI 280
               +  + F+ + L E V    LAGV     G+
Sbjct: 256 ETSVLFIVLFAWIFLKEEVSRRRLAGVVLAFLGV 289