Pairwise Alignments

Query, 1030 a.a., CheA signal transduction histidine kinase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 667 a.a., chemotaxis protein CheA from Pectobacterium carotovorum WPP14

 Score =  336 bits (862), Expect = 3e-96
 Identities = 218/628 (34%), Positives = 346/628 (55%), Gaps = 43/628 (6%)

Query: 421  EYVDALYRCLVTIQNSSGYMGLDDIRVYAERTAGLVDQARFSGMDFSL-MVDLMEQETSI 479
            E ++A++R   +I+  +G  G   ++        L+D AR   M  S  +++L  +   I
Sbjct: 34   EQLNAIFRAAHSIKGGAGTFGFKVLQETTHLLENLLDGARRGEMRLSTDIINLFLETKDI 93

Query: 480  IGDMLE-----------------KQIARISMPAPAQAPEAAPAAPEA---KAAPAPAAEA 519
            + D L+                 + + ++++ + A    A P A  A    A+P      
Sbjct: 94   MQDQLDAYKTAQEPNAESFEYICQALRQLALESKADGDAAQPDASVATQHSASPTSNGVG 153

Query: 520  KA---VAAPPAAKTDVTTDARAAASVDAEDEDAEDDDAAVVTISSVTGTPAPAAAV---- 572
            K    +A       ++        ++    +  + D +  VT+ +       +A +    
Sbjct: 154  KGEMRIALTGLKSQEIPQMLEELGNLGTVKDPHQTDTSVEVTLVTSESEDDISAVLCFVL 213

Query: 573  KPAAPAPASAVAAPAASAKPAAPVAPARPAAPTAPSAPAAPAGGQGAAAAAQAQQAGAAK 632
            +P   +  SAVA+    A+    +A        AP AP+AP   +  AA    +   A  
Sbjct: 214  EPEQISFKSAVASQPVVAEAVETLAVVEAPVAAAPVAPSAPVAAKPQAAPENGKNK-AKT 272

Query: 633  ASSTIRVDHEKLDHLMNLIGELIINRNRYTMLARRLEDDTNVVIAEVAQDLSETTYAMAR 692
              ++IRV  EK+D L+NL+GEL+I ++   MLA+R  +   V   ++   + +    + R
Sbjct: 273  GDTSIRVAVEKVDQLINLVGELVITQS---MLAQRSSELDPVAHGDLLNSMGQ----LER 325

Query: 693  ISDDLQDTIMKVRMVPVSSVFSRFPRLVRDLSRKSGKEVDLILEGEETELDKSVVEVIGD 752
             + DLQ+++M +RM+P+  VFSRFPRLVRDL+ K  K+V+L L G  TELDKS++E I D
Sbjct: 326  NARDLQESVMSIRMMPMEYVFSRFPRLVRDLAAKLDKQVELTLMGSSTELDKSLIERIID 385

Query: 753  PLVHLIRNAVDHGVESEDERVAKGKKAKGKVTLRAYHKGNSVAIEIEDDGKGIDPEKMRE 812
            PL HL+RN++DHG+ES D+RVA GK A G +TL A H+G ++ IE+ DDG G++ E++  
Sbjct: 386  PLTHLVRNSLDHGIESPDKRVAAGKSAVGNLTLSAEHQGGNICIEVIDDGAGLNRERILA 445

Query: 813  VAVRKGIITPDEAKAMDDREAMELIFAPGFSSAEKITDISGRGVGMDVVRTNIKNLKGSV 872
             A+ +G+   D   +M D E   LIFAPGFS+AEK+TD+SGRGVGMDVV+ NI+ + G V
Sbjct: 446  KALSQGLAVND---SMSDEEVGMLIFAPGFSTAEKVTDVSGRGVGMDVVKRNIQEMGGHV 502

Query: 873  SIHSEIGKGTRFTLSLPLTLAIIDALMVNVAGEMYAIPLDAVSETTKIEARRLTDVK-GR 931
             IH + GKGT   + LPLTLAI+D + V V  E++ +PL+AV E+ + ++  L  +  G 
Sbjct: 503  EIHFQAGKGTTIRILLPLTLAILDGMSVKVNKEVFILPLNAVMESLQPQSEDLYPLAGGE 562

Query: 932  KAVTLRGEVLGIASLSELLGLPKGDKQDVLS--VVVIHDNDRRLGLVVDRLLERQEIVIK 989
            + + +RGE L +  L  +  +  G K D     VV++    RR  L+VD+L+ + ++V+K
Sbjct: 563  RVLQVRGEYLPLVELFHIFDV-DGAKTDATQGIVVILQSAGRRYALLVDQLIGQHQVVVK 621

Query: 990  PLGAYLGDLKGISGATIMGDGSVILILD 1017
             L +    + G+S ATI+GDGSV LI+D
Sbjct: 622  NLESNYRKVPGVSAATILGDGSVALIVD 649



 Score = 64.3 bits (155), Expect = 3e-14
 Identities = 32/99 (32%), Positives = 55/99 (55%)

Query: 11  FADFIVEAKEHLETIEPNLLELEKAPDNLALLNEIFRPMHSLKGASGFLGLNRINGLAHR 70
           +  F  EA E L  +E +LL L+ +  +   LN IFR  HS+KG +G  G   +    H 
Sbjct: 5   YQTFFDEADELLADMEQHLLLLDPSEPDTEQLNAIFRAAHSIKGGAGTFGFKVLQETTHL 64

Query: 71  AENIMDELRKGDMTVTSEIMDVILSATDALRQMVDNLDT 109
            EN++D  R+G+M ++++I+++ L   D ++  +D   T
Sbjct: 65  LENLLDGARRGEMRLSTDIINLFLETKDIMQDQLDAYKT 103



 Score = 63.2 bits (152), Expect = 6e-14
 Identities = 46/135 (34%), Positives = 71/135 (52%), Gaps = 14/135 (10%)

Query: 222 FIDEAREMAENLSSGLLELERNPTEQGELVNDLFRFFHNLKGNSGIIGFAELNSLTHEAE 281
           F DEA E+  ++   LL L+ +  +  +L N +FR  H++KG +G  GF  L   TH  E
Sbjct: 8   FFDEADELLADMEQHLLLLDPSEPDTEQL-NAIFRAAHSIKGGAGTFGFKVLQETTHLLE 66

Query: 282 TLLNNVRRGEMTGSHELVDLLL----LVVDLLEALVTRIDPVSGNVTPFDISVILECLR- 336
            LL+  RRGEM  S ++++L L    ++ D L+A  T  +P   N   F+   I + LR 
Sbjct: 67  NLLDGARRGEMRLSTDIINLFLETKDIMQDQLDAYKTAQEP---NAESFE--YICQALRQ 121

Query: 337 ---KAVAGGDITLPE 348
              ++ A GD   P+
Sbjct: 122 LALESKADGDAAQPD 136