Pairwise Alignments

Query, 1030 a.a., CheA signal transduction histidine kinase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 654 a.a., fused chemotactic sensory histidine kinase in two-component regulatory system with CheB and CheY: sensory histidine kinase/signal sensing protein (NCBI) from Escherichia coli BW25113

 Score =  315 bits (807), Expect = 7e-90
 Identities = 210/629 (33%), Positives = 340/629 (54%), Gaps = 40/629 (6%)

Query: 410  LKTLAVDGTQREYVDALYRCLVTIQNSSGYMGLDDIRVYAERTAGLVDQARFSGMDFSLM 469
            L  L  +    E ++A++R   +I+  +G  G   ++        L+D+AR   M  +  
Sbjct: 27   LLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLMENLLDEARRGEMQLNTD 86

Query: 470  VDLMEQETSIIGDMLEKQIARISMPAPAQAPEAAPAAPEAKAAPAPAAEAKAVAAPPAAK 529
            +  +  ET    D++++Q+        +Q P+AA      +A    A EAK     P+A 
Sbjct: 87   IINLFLETK---DIMQEQLDAYKQ---SQEPDAASFDYICQALRQLALEAKGET--PSAV 138

Query: 530  TDVTTDARAAASVD-----------------AEDEDAEDDDAAVVTISSVTGTPAPAAAV 572
            T ++  A++    +                  E +  E++   + T++ V       +A+
Sbjct: 139  TRLSVVAKSEPQDEQSRSQSPRRIILSRLKAGEVDLLEEELGHLTTLTDVVKGADSLSAI 198

Query: 573  KPAAPAPASAVAAPAASAKPAAPVAPARPAAPTAPSAPAAP-AGGQGAAAAAQAQQAGAA 631
             P   A     A      +           +P   + P    A  Q      + ++   +
Sbjct: 199  LPGDIAEDDITAVLCFVIEADQITFETVEVSPKISTPPVLKLAAEQAPTGRVEREKTTRS 258

Query: 632  KASSTIRVDHEKLDHLMNLIGELIINRNRYTMLARRLEDDTNVVIAEVAQDLSETTYAMA 691
              S++IRV  EK+D L+NL+GEL+I ++   MLA+R  +   V   ++   + +    + 
Sbjct: 259  NESTSIRVAVEKVDQLINLVGELVITQS---MLAQRSSELDPVNHGDLITSMGQ----LQ 311

Query: 692  RISDDLQDTIMKVRMVPVSSVFSRFPRLVRDLSRKSGKEVDLILEGEETELDKSVVEVIG 751
            R + DLQ+++M +RM+P+  VFSR+PRLVRDL+ K GK+V+L L G  TELDKS++E I 
Sbjct: 312  RNARDLQESVMSIRMMPMEYVFSRYPRLVRDLAGKLGKQVELTLVGSSTELDKSLIERII 371

Query: 752  DPLVHLIRNAVDHGVESEDERVAKGKKAKGKVTLRAYHKGNSVAIEIEDDGKGIDPEKMR 811
            DPL HL+RN++DHG+E  ++R+A GK + G + L A H+G ++ IE+ DDG G++ E++ 
Sbjct: 372  DPLTHLVRNSLDHGIELPEKRLAAGKNSVGNLILSAEHQGGNICIEVTDDGAGLNRERIL 431

Query: 812  EVAVRKGIITPDEAKAMDDREAMELIFAPGFSSAEKITDISGRGVGMDVVRTNIKNLKGS 871
              A  +G+   +    M D E   LIFAPGFS+AE++TD+SGRGVGMDVV+ NI+ + G 
Sbjct: 432  AKAASQGLTVSEN---MSDDEVAMLIFAPGFSTAEQVTDVSGRGVGMDVVKRNIQKMGGH 488

Query: 872  VSIHSEIGKGTRFTLSLPLTLAIIDALMVNVAGEMYAIPLDAVSETTKIEARRLTDVK-G 930
            V I S+ G GT   + LPLTLAI+D + V VA E++ +PL+AV E+ +     L  +  G
Sbjct: 489  VEIQSKQGTGTTIRILLPLTLAILDGMSVRVADEVFILPLNAVMESLQPREADLHPLAGG 548

Query: 931  RKAVTLRGEVLGIASLSELLGLPKGDKQDVLS--VVVIHDNDRRLGLVVDRLLERQEIVI 988
             + + +RGE L I  L ++  +  G K +     VV++    RR  L+VD+L+ + ++V+
Sbjct: 549  ERVLEVRGEYLPIVELWKVFNV-AGAKTEATQGIVVILQSGGRRYALLVDQLIGQHQVVV 607

Query: 989  KPLGAYLGDLKGISGATIMGDGSVILILD 1017
            K L +    + GIS ATI+GDGSV LI+D
Sbjct: 608  KNLESNYRKVPGISAATILGDGSVALIVD 636



 Score = 70.1 bits (170), Expect = 5e-16
 Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 4/161 (2%)

Query: 1   MSQDFMDPEIFADFIVEAKEHLETIEPNLLELEKAPDNLALLNEIFRPMHSLKGASGFLG 60
           MS D  D   +  F  EA E L  +E +LL L+    +   LN IFR  HS+KG +G  G
Sbjct: 1   MSMDISD--FYQTFFDEADELLADMEQHLLVLQPEAPDAEQLNAIFRAAHSIKGGAGTFG 58

Query: 61  LNRINGLAHRAENIMDELRKGDMTVTSEIMDVILSATDALRQMVDNLDTTGGEGDVETES 120
            + +    H  EN++DE R+G+M + ++I+++ L   D +++ +D    +        + 
Sbjct: 59  FSVLQETTHLMENLLDEARRGEMQLNTDIINLFLETKDIMQEQLDAYKQSQEPDAASFDY 118

Query: 121 IIATID--AIMAGGAPPAAPRPAPAAPAPAPAPEPAPAAEP 159
           I   +   A+ A G  P+A           P  E + +  P
Sbjct: 119 ICQALRQLALEAKGETPSAVTRLSVVAKSEPQDEQSRSQSP 159



 Score = 61.6 bits (148), Expect = 2e-13
 Identities = 32/89 (35%), Positives = 52/89 (58%), Gaps = 1/89 (1%)

Query: 222 FIDEAREMAENLSSGLLELERNPTEQGELVNDLFRFFHNLKGNSGIIGFAELNSLTHEAE 281
           F DEA E+  ++   LL L+    +  E +N +FR  H++KG +G  GF+ L   TH  E
Sbjct: 12  FFDEADELLADMEQHLLVLQPEAPD-AEQLNAIFRAAHSIKGGAGTFGFSVLQETTHLME 70

Query: 282 TLLNNVRRGEMTGSHELVDLLLLVVDLLE 310
            LL+  RRGEM  + ++++L L   D+++
Sbjct: 71  NLLDEARRGEMQLNTDIINLFLETKDIMQ 99