Pairwise Alignments

Query, 277 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 281 a.a., Glycerol-3-phosphate ABC transporter, permease protein UgpE (TC 3.A.1.1.3) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  134 bits (336), Expect = 3e-36
 Identities = 79/281 (28%), Positives = 143/281 (50%), Gaps = 19/281 (6%)

Query: 6   IYDSRGLARVLDTAAAWTLAVLWALPLLYAVWTAFHPSEFSTRFTLAAPLTL-------D 58
           I + RGL     T  + T+ +L    +L+ ++ AF  +    R     P+TL       +
Sbjct: 2   IENRRGL-----TIFSHTMLILGIAVILFPLYVAFVAATLDDRAVFETPMTLLPGTQLLE 56

Query: 59  NFRAAW------DAAPFARYLVNTVLLVTMVLAGQLVLCTLAAYAFAKYDFPGKGILFAL 112
           N +  W      ++APF   ++N+ ++   +  G++ +  L+A+A   + FP + + F +
Sbjct: 57  NIKTIWVNGVGVNSAPFWLMMLNSFIMAFSITVGKITVSMLSAFAIVWFRFPLRNLFFWM 116

Query: 113 VLMQLMIMPDVLVVENYRTMSAIGVLDSTLAIGLPYMASAFGIFLLRQTFKSIPKELDEA 172
           + + LM+  +V +      ++ + +LDS   + LP MASA   FL RQ F ++P EL EA
Sbjct: 117 IFITLMLPVEVRIFPTVEVIANLKMLDSYAGLTLPLMASATATFLFRQFFMTLPDELVEA 176

Query: 173 AAVEGASTLQILWKVYVPLGKPVYLAYALVSVSYHWNNFLWPLIVTNTTNSRPLTVGLQV 232
           A ++GAS ++    + +PL K    A  +++  Y WN +LWPL++    N      G++ 
Sbjct: 177 ARIDGASPMRFFRDIVLPLSKTNLAALFVITFIYGWNQYLWPLLIITDVNLGTAVAGIKG 236

Query: 233 FSSTEQG-VDWSIITAATLMTSGPLLIGFLLFQRQFVQSFM 272
             +T +G   W+ + AA L+T  P ++  L  QR FV+  +
Sbjct: 237 MIATGEGTTQWNQVMAAMLLTLIPPVVIVLAMQRAFVRGLV 277