Pairwise Alignments

Query, 277 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 271 a.a., carbohydrate ABC transporter permease from Dickeya dianthicola ME23

 Score =  141 bits (355), Expect = 2e-38
 Identities = 79/260 (30%), Positives = 138/260 (53%), Gaps = 5/260 (1%)

Query: 22  WTLAVLWALPLLYAVWTAFHPSE--FSTRFTLAAPLTLDNFRAAWDAAPFARYLVNTVLL 79
           W +A++  LP   A+ T+F      F   FTL +   LDN+  AW    F  Y +N++L+
Sbjct: 13  WIVALMTVLPFGLALMTSFKTQTELFQGIFTLPSRFNLDNYLTAWQQGHFNLYFMNSILV 72

Query: 80  VTMVLAGQLVLCTLAAYAFAKYDFPGKGILFALVLMQLMIMPDVLVVENYRTMSAIGVLD 139
           V  V+   L+L  L+ + FA    PGK +  A + + +++  +  ++  Y  +  +G+ +
Sbjct: 73  VVPVVISSLLLGILSGFGFAFLRIPGKRLFAAALALGMVLPSEAFIIPLYHELHWLGLTN 132

Query: 140 STLAIGLPYMASA--FGIFLLRQTFKSIPKELDEAAAVEGASTLQILWKVYVPLGKPVYL 197
           S LA+ LP +A +  F   ++   F+ +P+EL EA+ ++GA  L+ILW + VP   P+  
Sbjct: 133 SYLALILPQVALSMPFATLMIASAFQQVPRELLEASVMDGAPRLKILWGILVPAIWPMLS 192

Query: 198 AYALVSVSYHWNNFLWPLIVTNTTNSRPLTVGLQVFSSTEQGVDWSIITAATLMTSGPLL 257
             AL+   + WN FL PLI+ N    R L +G+  F + +  ++  ++ A  ++   PL+
Sbjct: 193 TLALLLFIWTWNEFLIPLILVNRDELRTLPIGMMFFQN-KNTINIPVLMAGAMIVILPLI 251

Query: 258 IGFLLFQRQFVQSFMRAGIK 277
             FL FQR+F+       +K
Sbjct: 252 AIFLCFQRKFISGVTEGAVK 271