Pairwise Alignments

Query, 277 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 349 a.a., carbohydrate ABC transporter permease from Dickeya dianthicola 67-19

 Score =  145 bits (365), Expect = 2e-39
 Identities = 78/223 (34%), Positives = 122/223 (54%), Gaps = 1/223 (0%)

Query: 55  LTLDNFRAAWDAAPFARYLVNTVLLVTMVLAGQLVLCTLAAYAFAKYDFPGKGILFALVL 114
           L  DN+        FA YL NTV +  M     L+L ++AA+A AKY+F G+G +  L L
Sbjct: 128 LETDNYTTPMSKFHFATYLKNTVFVTVMATLLTLLLSSMAAFALAKYEFRGRGTVLTLFL 187

Query: 115 MQLMIMPDVLVVENYRTMSAIGVLDSTLAIGLPYMASAFGIFLLRQTFKSIPKELDEAAA 174
             +MI   V++V  +  +  + + D+   + +P +A+  G+FLLRQ   +IP EL EAA 
Sbjct: 188 STMMIPLSVVMVPTFLVVIGLRMGDNLWGVIIPTIATPTGVFLLRQYMLTIPDELIEAAR 247

Query: 175 VEGASTLQILWKVYVPLGKPVYLAYALVSVSYHWNNFLWPLIVTNTTNSRPLTVGLQVFS 234
           ++ AS  +I WK+ +PL  P     A+ SV + WN+FLWPLIV ++ ++  L +GL  F 
Sbjct: 248 IDAASEFRIYWKIILPLTAPALAVLAIFSVIWRWNDFLWPLIVLSSQDNFTLQIGLNAFQ 307

Query: 235 STEQGVDWSIITAATLMTSGPLLIGFLLFQRQFVQSFMRAGIK 277
             +  V W  I A T+++  P+   F+  Q+         G+K
Sbjct: 308 G-QFSVQWHYILAMTMLSLLPVTAVFVFLQKYITTGIANTGMK 349