Pairwise Alignments

Query, 277 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 300 a.a., carbohydrate ABC transporter permease from Dickeya dadantii 3937

 Score =  136 bits (343), Expect = 5e-37
 Identities = 76/261 (29%), Positives = 136/261 (52%), Gaps = 7/261 (2%)

Query: 24  LAVLWALPLLYAVWTAFHPSE--FSTRFTLAAPLTLDNFRAAWDAAP---FARYLVNTVL 78
           + +L   PL +    +F P+   F+T     A  T D F   W       F  Y++NT  
Sbjct: 39  VGILMLYPLAWMFSASFKPNHEIFTTLSLWPAHATWDGFINGWKTGTEYNFGHYMINTFK 98

Query: 79  LVTMVLAGQLVLCTLAAYAFAKYDFPGKGILFALVLMQLMIMPDVLVVENYRTMSAIGVL 138
            V   +A  ++  T+ AY FA+++ P K   FA ++  +++   VL++  Y     +G+L
Sbjct: 99  YVIPKVALTVISSTIVAYGFARFEIPWKNFWFATLIATMLLPSTVLLIPQYIMFREMGML 158

Query: 139 DSTLAIGLP--YMASAFGIFLLRQTFKSIPKELDEAAAVEGASTLQILWKVYVPLGKPVY 196
           +S L + +P  +    F +F+L Q  + +P++++EAA ++G ++ Q+LW V VP+ KP  
Sbjct: 159 NSYLPLYVPVAFATQGFFVFMLIQFLRGVPRDMEEAAQIDGCNSWQVLWYVVVPILKPAI 218

Query: 197 LAYALVSVSYHWNNFLWPLIVTNTTNSRPLTVGLQVFSSTEQGVDWSIITAATLMTSGPL 256
           ++ AL    +  N+F+ PLI   + +  P+ + L++     +G  W+ I A   ++  P 
Sbjct: 219 ISVALFQFMWSMNDFIGPLIYVYSVDKYPIALALKMSIDVTEGAPWNEILAMASISILPS 278

Query: 257 LIGFLLFQRQFVQSFMRAGIK 277
           +I F + QR FVQ    +GIK
Sbjct: 279 IIIFFMAQRYFVQGVTSSGIK 299