Pairwise Alignments

Query, 277 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 259 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

 Score =  143 bits (360), Expect = 4e-39
 Identities = 77/223 (34%), Positives = 121/223 (54%), Gaps = 1/223 (0%)

Query: 55  LTLDNFRAAWDAAPFARYLVNTVLLVTMVLAGQLVLCTLAAYAFAKYDFPGKGILFALVL 114
           +  +NF        F  +L N+V +  +     L++  +AA+A +KY F G+  +F L++
Sbjct: 38  IATENFTDPLTQFSFLTFLKNSVFVTFVATVLTLIVNAMAAFALSKYRFRGEKAIFVLII 97

Query: 115 MQLMIMPDVLVVENYRTMSAIGVLDSTLAIGLPYMASAFGIFLLRQTFKSIPKELDEAAA 174
             LMI   V++V  Y  +  +G++D+   + +P +A+  G+FLLRQ   +IP EL EAA 
Sbjct: 98  STLMIPLTVVMVPAYLVIVGVGLVDNLWGVIIPTVATPTGVFLLRQYMLTIPDELIEAAR 157

Query: 175 VEGASTLQILWKVYVPLGKPVYLAYALVSVSYHWNNFLWPLIVTNTTNSRPLTVGLQVFS 234
           V+ AS  +I W++ +PL  P     A+ SV + WN+FLWPLIV ++  +  L VGL  F 
Sbjct: 158 VDAASEFRIFWRIILPLTAPALAVLAIFSVLWRWNDFLWPLIVLSSRENFTLQVGLNAFQ 217

Query: 235 STEQGVDWSIITAATLMTSGPLLIGFLLFQRQFVQSFMRAGIK 277
             E  V W  I A T ++  P+ + FL  QR         G+K
Sbjct: 218 G-EFSVQWHYILAMTFLSLAPVTVVFLFLQRYITTGIAGTGMK 259