Pairwise Alignments

Query, 277 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 291 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

 Score =  140 bits (352), Expect = 4e-38
 Identities = 78/253 (30%), Positives = 140/253 (55%), Gaps = 6/253 (2%)

Query: 31  PLLYAVWTAFHPSE--FSTRFTLAAPLTLDNFRAAWDA--APFARYLVNTVLLVTMVLAG 86
           P+L+ +  +F P +  F +   + + + +  +   W      F ++  N+  +  +   G
Sbjct: 38  PILWMISGSFRPQDELFGSSSLIPSAVDVGGYIRGWTGLQVSFGQFFWNSFFISVLATIG 97

Query: 87  QLVLCTLAAYAFAKYDFPGKGILFALVLMQLMIMPDVLVVENYRTMSAIGVLDSTLAIGL 146
            +V C+L A+AFA+  F G+   FAL+L  LM+   V+++  Y     +G ++++L + +
Sbjct: 98  NVVGCSLTAFAFARLRFGGRNFWFALMLGTLMLPYHVVLIPQYILFLEMGWVNTSLPLIV 157

Query: 147 P-YMAS-AFGIFLLRQTFKSIPKELDEAAAVEGASTLQILWKVYVPLGKPVYLAYALVSV 204
           P Y+A+ AF IFL+ Q F+ IP+ELDEAA ++G S  +I WK+ +PL  PV    A+ S 
Sbjct: 158 PKYLATDAFFIFLMVQFFRGIPRELDEAAVMDGCSPFRIYWKIMLPLSMPVLATAAIFSF 217

Query: 205 SYHWNNFLWPLIVTNTTNSRPLTVGLQVFSSTEQGVDWSIITAATLMTSGPLLIGFLLFQ 264
            + W++F  PLI  N  N+  + +GL+ F  +    DW+ + A + ++  P+ + FL FQ
Sbjct: 218 IWTWDDFFGPLIYLNDINTYTVQLGLRSFVDSTGSSDWTSLFAMSNLSLVPVFLFFLFFQ 277

Query: 265 RQFVQSFMRAGIK 277
           R  ++     G+K
Sbjct: 278 RLLIEGIATTGMK 290