Pairwise Alignments

Query, 288 a.a., transcriptional regulator, GntR family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 266 a.a., GntR family transcriptional regulator from Paraburkholderia sabiae LMG 24235

 Score = 85.9 bits (211), Expect = 9e-22
 Identities = 68/245 (27%), Positives = 115/245 (46%), Gaps = 22/245 (8%)

Query: 6   YLVIYEWLSEQIRNKVYQPGDKIPNESDLAAMFGVHRMTVRQAIDKLVNDHMLVRKRSKG 65
           Y  I   +++ + +  ++PG+ IP+E +LAA + V + TVR+AID+L  D++LVR++ KG
Sbjct: 36  YQQIKALITQSLESGEWKPGEIIPSEVELAARYKVSQGTVRKAIDELAADNLLVRRQGKG 95

Query: 66  TFLLSEKSPVLTRSLESITTYYDDIVSAGLAPH---YKTIAAGIEYADAEVAAHLNLAER 122
           TF       V T + E     +  +++   A H    + +      A A++A  L+L   
Sbjct: 96  TF-------VATHNEERAQFRFLRLLADDGAEHPHISRLLECRRLRASADIARQLDLKPA 148

Query: 123 QPVIFLYRLMLASGVPLVLERSILPTDMVPDFLEKKLDTV---LYKVLHEDYGMRLLYSR 179
            PV+ + RL+   G   VL+   LP  +      ++L      LY +   ++G R++ + 
Sbjct: 149 DPVVLIKRLLTFDGEDTVLDEIWLPGGVFRGLTLERLSEYKGPLYAMFETEFGTRMIRAS 208

Query: 180 QELGAVMPTESERKHLKIGDNCPCIWVESVVYTDTGRAVEYSRALHRGDKYRFRCAIGGY 239
           +++ AV    S    L +    P + VE V YT   R VE  R  +            GY
Sbjct: 209 EKIRAVAADPSVADLLHVPTGFPLLSVERVSYTYGDRPVEVRRGWY---------VTTGY 259

Query: 240 VYDKD 244
            Y  D
Sbjct: 260 YYQND 264