Pairwise Alignments

Query, 485 a.a., cysteinyl-tRNA synthetase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 461 a.a., cysteinyl-tRNA synthetase from Agrobacterium fabrum C58

 Score =  324 bits (830), Expect = 5e-93
 Identities = 202/491 (41%), Positives = 271/491 (55%), Gaps = 67/491 (13%)

Query: 1   MQLYNTLTRKKEHFEPAVPGKVNMYVCGITAYDLCHIGHARSAVVFDVLVRYLRHT-GLD 59
           ++L+NTLTR+K  F P     V MYVCG T YD  HIG+AR  +VFDVL R LRH  G D
Sbjct: 5   LKLHNTLTREKSEFAPIDADNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVYGED 64

Query: 60  -VTFARNFTDVDDKIITRANQE------GLTSQEVAEKYIATFYEDMDRLNVLRADLEPR 112
            VT+ARN TD+DDKI  RA ++            V +K    F++D+  L  L+  +EPR
Sbjct: 65  HVTYARNITDLDDKINARALRDYPHLPLNDAIHAVTKKTADQFHDDVAALGCLQPTVEPR 124

Query: 113 ATTHIEEMISLCVRLIEQDKAYATPSGDVYFRVRAFPGYGKLSGRDVDDLRSGARVAPGE 172
           AT +I EMI L  RLIE+  AY    G+V F  R+   YG+LS R +D+ ++GARVA   
Sbjct: 125 ATDYIAEMIYLIERLIERGHAYKA-GGEVLFDTRSMADYGQLSKRPLDEQQAGARVAVEA 183

Query: 173 EKEDPLDFALWKAAKPGEPFWESPWGNGRPGWHIECSAMSEKHLPLPLDIHGGGQDLVFP 232
            K++P DF LWK +   EP WESPWG GRPGWHIECSAM+ ++L    DIHGGG DL+FP
Sbjct: 184 HKKNPGDFVLWKLSSESEPGWESPWGLGRPGWHIECSAMAGRYLGEVFDIHGGGLDLIFP 243

Query: 233 HHENEIAQTEAALGKD-FVRYWVHNGFVQVNAEKMSKSLGNFRTIRDIL-------ENYL 284
           HHENEIAQ+  A G       W+HNGFVQV   KMSKS GNF TI ++L         + 
Sbjct: 244 HHENEIAQSRCAHGTHVMANVWMHNGFVQVEGRKMSKSEGNFVTIYELLHTDKFGGRQWP 303

Query: 285 PETLRYFLLTKHYRSPIDFTFESMDEAEKNLKRIYEALGLLHAELEREKWTSGPLPKDVT 344
            E LR  +L  HYR PIDF+ + ++EAE+ L                 KW +        
Sbjct: 304 GEVLRLAMLMTHYREPIDFSVKRLEEAERLL----------------SKWPAAETSDAAA 347

Query: 345 EEFEGLRQAFADAMEDDMNTAAALGHVFTMVRLANRILDNKGQRKTEGARAFFRAVLDEA 404
           +E         +A+ DD+NT AA+  +  +   AN          T+ +R      L   
Sbjct: 348 DE------TVLEALADDLNTVAAVQALHALAHAAN----------TDPSR------LPAF 385

Query: 405 ATWFAVLGVFGREPAGFLAELRACRVARKGIDPAKVEELLQARINARADKDFARADAIRD 464
           A   A+LGV  ++      E+    V       + V+ L++ R+     K+FA AD +RD
Sbjct: 386 AASAALLGVLPKK-----TEMDEAIV-------SAVDALVELRLEMLKAKNFAEADRLRD 433

Query: 465 EIAALGIEVRD 475
           E++  GI+++D
Sbjct: 434 ELSEKGIQLKD 444