Pairwise Alignments

Query, 492 a.a., DNA repair protein RadA (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 460 a.a., DNA repair protein RadA from Pectobacterium carotovorum WPP14

 Score =  319 bits (818), Expect = 1e-91
 Identities = 179/452 (39%), Positives = 263/452 (58%), Gaps = 11/452 (2%)

Query: 3   LRETYVCTACGARAPQWRGQCPACKEWNTL-ELTVAPREGKAGARPG--ASSVGAQSRAQ 59
           ++  +VC  CGA  P+W+GQC AC  WNT+ E+ +A        R    A      SR Q
Sbjct: 5   VKRAFVCNECGADYPRWQGQCSACHAWNTITEVRLASASVSRSDRLTGYAGESAGVSRVQ 64

Query: 60  PLKDVADHGAEPFGSGLDALDRVLGKGLVPGAAILVGGEPGIGKSTLLLQVAGAVAAAGR 119
            L +++      F +G    DRVLG G+VPG+AIL+GG PG GKSTLLLQ    ++   +
Sbjct: 65  KLSEISLEALPRFSTGFQEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTLCKLSENMK 124

Query: 120 GVLYLSGEESLPQLKARAARLGVLHDELMAVATTRLDDVLPHLEGPEAPALLIVDSVQTV 179
             LY++GEESL Q+  RA RL +    L  ++ T ++ +    E  E P L+++DS+Q +
Sbjct: 125 -TLYVTGEESLQQVAMRAHRLNLPTQNLNMLSETSIEQICLIAE-QEQPKLMVIDSIQVM 182

Query: 180 SSDRAEGLPGNVSQVRAVSTEIVEACKRSGTTVLLVGHVTKDGALAGPRLLEHLVDTVIS 239
                +  PG+V+QVR  +  +    K  G  +++VGHVTKDG+LAGP++LEH +D  + 
Sbjct: 183 HLADIQSSPGSVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHCIDCSVL 242

Query: 240 IEGDRRQMFRLLRVLKNRFGPNQELLVFRMVEQGMEVVEDPSTFFLGARDPALSGTALVM 299
           ++GD    FR LR  KNRFG   EL VF M EQG+  + +PS  FL   D   SG+++++
Sbjct: 243 LDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREISNPSAIFLSRGDEITSGSSVMV 302

Query: 300 AVDGQRPLAVEVQALVTRSYLAIPRRTGLGFDVNRLHLLLAVLEKRLRLNFGQVDIYAKI 359
             +G RPL VE+QALV +S +A PRR  +G + NRL +LLAVL +   L     D++  +
Sbjct: 303 VWEGTRPLLVEIQALVDQSMMANPRRVAVGLEQNRLAILLAVLHRHGGLQMSDQDVFVNV 362

Query: 360 GGGMKLQDPGMDLGLVAAVLSSFYDLPLPERAVFWGEVDLNGQVRPVAAHTIRRDQARRL 419
            GG+K+ +   DL L+ +++SSF D PLP+  V +GEV L G++RPV +   R  +A + 
Sbjct: 363 VGGVKVTETSADLALLLSLVSSFRDRPLPQDLVIFGEVGLAGEIRPVPSGQERITEAAKH 422

Query: 420 GYTPILHPADDAARGVPT------VAALQDAL 445
           G+   + P  +  + VP       V  L DAL
Sbjct: 423 GFKRAIVPHANMPKKVPASMQVFGVKKLADAL 454