Pairwise Alignments

Query, 492 a.a., DNA repair protein RadA (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 468 a.a., DNA repair protein from Agrobacterium fabrum C58

 Score =  348 bits (893), Expect = e-100
 Identities = 179/433 (41%), Positives = 269/433 (62%), Gaps = 8/433 (1%)

Query: 2   KLRETYVCTACGARAPQWRGQCPACKEWNTLELTVAPREGKAGARPGASSVGAQSRAQPL 61
           K +  +VC  CG    +W G+C  C EWNT    +   +   G   G   V  + R   L
Sbjct: 3   KAKTQFVCQNCGTVHNRWAGKCEGCGEWNT----IVEEDPMGGIGSGPGKVPKKGRPVTL 58

Query: 62  KDVADHGAEP--FGSGLDALDRVLGKGLVPGAAILVGGEPGIGKSTLLLQVAGAVAAAGR 119
             ++    E     +G+  LDR  G G V G+A+L+GG+PGIGKSTLL+Q A A++  G 
Sbjct: 59  TSLSGEIEEAPRIPTGISELDRATGGGFVRGSAVLIGGDPGIGKSTLLMQAAAALSRRGH 118

Query: 120 GVLYLSGEESLPQLKARAARLGVLHDELMAVATTRLDDVLPHLEGPEAPALLIVDSVQTV 179
            V+Y+SGEE++ Q++ RA RLG    +++  A T ++D+L  +   + P L+I+DS+QT+
Sbjct: 119 RVIYVSGEEAVAQVRLRAQRLGSADTDVLLAAETNVEDILATVSEGKRPDLIIIDSIQTL 178

Query: 180 SSDRAEGLPGNVSQVRAVSTEIVEACKRSGTTVLLVGHVTKDGALAGPRLLEHLVDTVIS 239
            SD A+  PG V+QVR     ++   K++G T++LVGHVTK+G +AGPR++EH+VD V+ 
Sbjct: 179 WSDTADSAPGTVTQVRTGVQAMIRFAKQTGATMVLVGHVTKEGQIAGPRVVEHMVDAVLY 238

Query: 240 IEGDRRQMFRLLRVLKNRFGPNQELLVFRMVEQGMEVVEDPSTFFLGARDPALSGTALVM 299
            EGDR   +R+LR +KNRFGP  E+ VF M + G+  V +PS  FLG R+    G A+  
Sbjct: 239 FEGDRGHHYRILRTVKNRFGPTDEIGVFEMSDGGLREVSNPSELFLGERNEKSPGAAVFA 298

Query: 300 AVDGQRPLAVEVQALVTRSYLAIPRRTGLGFDVNRLHLLLAVLEKRLRLNFGQVDIYAKI 359
            ++G RP+ VEVQALV  + L  PRR  +G+D +RL ++LAVLE    +  GQ D+Y  +
Sbjct: 299 GIEGTRPVLVEVQALVAATSLGTPRRAVVGWDSSRLAMILAVLEAHCGVKLGQHDVYLNV 358

Query: 360 GGGMKLQDPGMDLGLVAAVLSSFYDLPLPERAVFWGEVDLNGQVRPVAAHTIRR-DQARR 418
            GG ++ +P  D+ + +A++SS   L LP   V++GE+ L+G VRPV AHT++R  +A +
Sbjct: 359 AGGYRISEPAADMAIASALVSSLAGLALPADCVYFGEISLSGAVRPV-AHTVQRLKEAEK 417

Query: 419 LGYTPILHPADDA 431
           LG++  L P+  A
Sbjct: 418 LGFSAALLPSGSA 430