Pairwise Alignments

Query, 762 a.a., integral membrane sensor hybrid histidine kinase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 995 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score =  244 bits (623), Expect = 2e-68
 Identities = 148/394 (37%), Positives = 224/394 (56%), Gaps = 13/394 (3%)

Query: 369 EAELREARSQSEIANHAKSLFLANMSHELRTPLNGLLGMLQLIKGNEDANERDAYLDLAQ 428
           EA+LRE++S +E AN AKSLFLANMSHE+RTP+NG++GM  L  G E   ++  ++   +
Sbjct: 449 EAQLRESKSVAEAANKAKSLFLANMSHEIRTPMNGIIGMAHLALGGELPAKQRHHIQSIK 508

Query: 429 RSGRRLTDLLGDLLDLSRIEAGGMRIQSRPFTLTSTFAALAETFSPMHQSKRVPLILACA 488
           +S +RL  ++ D+LDLS+ EAG + I + PF L +         +     KR+P+ +  A
Sbjct: 509 QSAQRLLGIINDILDLSKAEAGKVVIDAAPFDLANLIDEAISVVAAQASEKRLPINVRIA 568

Query: 489 PEIPPVLVGDEVHLRQILFNLVGNAMKFTEKGEVRLEVFPLPPMPSGEVRLLFIVTDTGI 548
            E+P  ++GD + +RQIL N + NA+KFT  G + ++V       +   +L F V+DTG 
Sbjct: 569 SEVPRGVIGDPLRIRQILLNYLSNAVKFTSSGGIDVDVQIEGGKTAPPTKLRFAVSDTGC 628

Query: 549 GIPDDKLDHIVRPFAQVEESYTRSHQGAGLGLAIVRNLVLAMGGTLQFDSQVGEGTSVCM 608
           G+  ++   + + F Q E S +    G GLGLAI R L   MGG    +SQ G G++   
Sbjct: 629 GLTPEQQATLFQSFQQAEASTSAKFGGTGLGLAIARQLAELMGGQAGVESQYGSGSTFWF 688

Query: 609 TMPFRLPDRTTHIAPQQDTPV----GTAH------GGLRILLAEDDEVSRLCARRLLEQM 658
           T+ F+          +  +P+      AH       G ++LLAEDD  +++ A  LLE  
Sbjct: 689 TVQFQGAVDGVDCPSKFLSPIKIHNNFAHQDHSILQGAQVLLAEDDLTNQMVAVGLLEAA 748

Query: 659 GHEVTTTANGAQALDALRAKRFDCVLMDVQMDVMDGVEATRQIRDGASGVLDARIPVIAM 718
           G  V    NGA A++   + +++ VLMDV+M  MDG+ ATR IR+    +LD  +P++AM
Sbjct: 749 GMLVDVVGNGAAAVEKAASGKYEIVLMDVRMPGMDGITATRLIRENVE-LLD--LPIVAM 805

Query: 719 TAYAMAGDREKFLAQGMDGYVSKPVMSAELAAAI 752
           TA AM   +++ LA GM  +VSKP    +L   I
Sbjct: 806 TANAMNEHKDECLAAGMSDFVSKPFQPEQLYGVI 839