Pairwise Alignments

Query, 313 a.a., Polyprenyl synthetase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 295 a.a., farnesyl diphosphate synthase from Pseudomonas putida KT2440

 Score =  212 bits (540), Expect = 8e-60
 Identities = 132/281 (46%), Positives = 170/281 (60%), Gaps = 20/281 (7%)

Query: 34  RLRASMEYSLNAGGKRVRPVLCLTTAALFGLPTERVMPFAAAIEMIHTYSLIHDDLPAMD 93
           RL A+M YS+  GGKRVRP+L        G P E+    A A+E+IH YSL+HDDLPAMD
Sbjct: 30  RLYAAMRYSVMNGGKRVRPLLAYAACEALGAPAEQANGAACAVELIHAYSLVHDDLPAMD 89

Query: 94  DDDLRRGKPSNHKMFDEATAILAGDGLLTDAFDFMAGVGAGVGAAAGDENGGNAAIPAAN 153
           DDDLRRG+P+ HK FDEA AILAGDGL + AF  +             +   +  I +  
Sbjct: 90  DDDLRRGQPTTHKAFDEACAILAGDGLQSLAFSALL------------DPCLSPQIDSIR 137

Query: 154 VLAALRAVARAAGAPGMVGGQALDMEYTGRTGVTLEEMAA--MHAMKTGALLRASCLSGA 211
            LA ++ +A+AAG  GMVGGQA+D+   G  G  L++ A   MH  KTGAL+ AS   GA
Sbjct: 138 -LAMVQVLAKAAGPAGMVGGQAIDL---GSVGQKLDQQALEFMHRHKTGALIEASVRLGA 193

Query: 212 LL-AGADADALARIADYGAHIGAAFQIVDDILDEVGDEAEIGKPVGSDAEQGKTTYPSLL 270
           L  A A+   L  +  Y   IG AFQ+ DDILD   D A +GK  G+D  + K TYP+LL
Sbjct: 194 LASARAEPVQLDALQTYAQAIGLAFQVQDDILDVESDTATLGKRQGADIARDKPTYPALL 253

Query: 271 GVERSRALARERADAAIERLSPYTGPDADFLRSLASYIVDR 311
           G+E ++A A E  D A+  L  + G  A+ LR+LA YIV+R
Sbjct: 254 GLEAAKAYAIELRDQALAALQGF-GEKAEPLRALARYIVER 293