Pairwise Alignments

Query, 313 a.a., Polyprenyl synthetase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 299 a.a., Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl diphosphate synthase (EC 2.5.1.29) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  203 bits (516), Expect = 5e-57
 Identities = 123/277 (44%), Positives = 163/277 (58%), Gaps = 17/277 (6%)

Query: 38  SMEYSLNAGGKRVRPVLCLTTAALFGLPTERVMPFAAAIEMIHTYSLIHDDLPAMDDDDL 97
           +M+Y    GGKR+RP L   T  +FG+ T  +   AAA+E IH YSLIHDDLPAMDDDDL
Sbjct: 35  AMQYGALLGGKRLRPFLVYATGQMFGVSTATLDAPAAAVECIHAYSLIHDDLPAMDDDDL 94

Query: 98  RRGKPSNHKMFDEATAILAGDGLLTDAFDFMAGVGAGVGAAAGDENGGNAAIPAANVLAA 157
           RRG P+ H  F EA AILAGD L T AF  ++             +     +   + +A 
Sbjct: 95  RRGLPTCHIKFGEANAILAGDALQTLAFAIIS-------------DAPMPEVADRDRIAM 141

Query: 158 LRAVARAAGAPGMVGGQALDMEYTGRTGVTLEEMAAMHAMKTGALLRASCLSGALLAGAD 217
           +  +A A+G  GM GGQALD+   G+  +TL+ +  +H  KTGAL+RA+   GAL AG  
Sbjct: 142 IAELANASGIAGMCGGQALDLAAEGQR-ITLDALERIHRHKTGALIRAAVRLGALSAGDK 200

Query: 218 ADALARIAD-YGAHIGAAFQIVDDILDEVGDEAEIGKPVGSDAEQGKTTYPSLLGVERSR 276
                 I D Y   IG AFQ+ DDILD VGD A +GK  G+D + GK+TYP+LLG+E++R
Sbjct: 201 GRNTLPILDRYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQAR 260

Query: 277 ALARERADAAIERLSPYTGP--DADFLRSLASYIVDR 311
             AR+  + A + L        D   L +LA+YI+ R
Sbjct: 261 NKARDLIEDARQSLHQLAAQSLDTSALEALANYIIQR 297