Pairwise Alignments

Query, 557 a.a., AMP-dependent synthetase and ligase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

Subject, 645 a.a., acetate--CoA ligase from Magnetospirillum magneticum AMB-1

 Score =  214 bits (544), Expect = 1e-59
 Identities = 175/522 (33%), Positives = 242/522 (46%), Gaps = 30/522 (5%)

Query: 51  DDAGVRRDYTFAWMAEASAKLANALRLRGIRKGDRVMLVLYRRIEFWVSMLALHRLGAVA 110
           DD       T+  + E   +LANA+   G++KGDRV + L    E  V+MLA  R+GAV 
Sbjct: 97  DDPNESAHITYGDLHERVCRLANAMTDLGVKKGDRVTIYLPMIPEAAVAMLACARVGAVH 156

Query: 111 IPAPAQLTPKDIVFRVERAKTRCVIVDHS---------ITERVEAARP---DCPGLAVCV 158
                  +P  +  R++   +  +I             +   V+ A      C  + V  
Sbjct: 157 SIVFGGFSPDALAGRIQDCDSSLLITADEGLRGGRKVPLKANVDKALETCWSCKSVIVVK 216

Query: 159 QVGGDALPRGWVDYDTIFTPAEARFPRPESPLEFAGGEDPLLIFFSSGTTGMPKMVEHVH 218
           + GGD         D  +    A+     +P+E +  EDPL + ++SG+TG PK V H  
Sbjct: 217 RTGGDI--HMVTGRDHWYHDLVAKAAPTHTPVEMSA-EDPLFLLYTSGSTGKPKGVVHTT 273

Query: 219 T-YPLGHLLTGMYWHDLVPGDLHLTLADTGWGKAVWGKFYGQWMAGASVFVYDFRGKFEP 277
             Y +   +T  Y  D   GD++   AD GW        YG    GA   +++    +  
Sbjct: 274 GGYLVYASMTHQYVFDYHEGDIYWCTADVGWVTGHSYIVYGPLANGAITLMFEGIPNYPT 333

Query: 278 AALL-DVLAAHAVTTFCAPPTVYRFLVRQD---LSAYDLSKLRHCTTAGELLNDSVFHDW 333
            +   DV+  H V  F   PT  R L+R+    +     + LR   + GE +N   +  +
Sbjct: 334 VSRFWDVVDKHKVNIFYTAPTAIRSLMREGEEPVKKTSRASLRLLGSVGEPINPEAWTWY 393

Query: 334 KAATG---LEIHEGYGQTETT-LQIATLPCMTP-KAGSIGRPMPGWDVVLQDAAGNICPP 388
               G     I + + QTET  + I  LP  T  K GS  RP  G   V+ DA G     
Sbjct: 394 HRVVGDGRCPIVDTWWQTETGGILITPLPGATALKPGSATRPFFGVKPVMVDAEGKTLEG 453

Query: 389 GEEGEICVRVAEGLPVGLFRGYLEEPEKTASVMFGGY---YHTGDKAWMDEDGYYWFLGR 445
             EG +C+    G P G  R    + E+     F  Y   Y TGD A  DEDGYYW  GR
Sbjct: 454 AVEGNLCL-AEPGWP-GQMRTLWGDHERFKQSYFATYQGMYFTGDGARRDEDGYYWITGR 511

Query: 446 VDDLIKSSGYRIGPFEVESALVAHPAVVEAAVTGVPDPLRGQAVKATVVLAAGYTASDAL 505
           VDD+I  SG+R+G  EVESALVAHP V EAAV G P  ++GQ + A V L AG   S+ L
Sbjct: 512 VDDVINVSGHRMGTAEVESALVAHPKVAEAAVVGYPHDIKGQGIYAYVTLVAGEEPSEDL 571

Query: 506 TKELQDHVKKVTAPYKYPRIIDYVAELPKTISGKIKRAEIRE 547
            KEL + V+K   P   P +I +   LPKT SGKI R  +R+
Sbjct: 572 RKELVNWVRKEIGPIASPDLIQWSPGLPKTRSGKIMRRILRK 613