Pairwise Alignments

Query, 342 a.a., Protein RecA from Methylophilus sp. DMC18

Subject, 355 a.a., recombinase A (RefSeq) from Shewanella amazonensis SB2B

 Score =  478 bits (1231), Expect = e-140
 Identities = 235/324 (72%), Positives = 284/324 (87%), Gaps = 1/324 (0%)

Query: 1   MDDNKSKALAAALSQIEKQFGKGSIMRMGDADIGEDLQVVSTGSLGLDIALGVGGLPRGR 60
           +D NK KALAA L QIEKQFGKGSIM++G+ D   D++ +STGSL LD+ALG GGLP GR
Sbjct: 3   IDPNKEKALAAVLGQIEKQFGKGSIMKLGE-DRSMDVETISTGSLSLDVALGAGGLPMGR 61

Query: 61  IVEIYGPESSGKTTLTLQVIAEMQKLGGTAAFIDAEHALDPQYASKLGVNVPDLLISQPD 120
           IVEIYGPESSGKTTLTL+VIA  Q+ G   AFIDAEHALDP YA KLGV++ +LL SQPD
Sbjct: 62  IVEIYGPESSGKTTLTLEVIAAAQREGKVCAFIDAEHALDPVYARKLGVDIDNLLCSQPD 121

Query: 121 TGEQALEIADMLVRSGSVDIVVVDSVAALTPRAEIEGEMGDSHMGLQARLMSQALRKLTG 180
           TGEQALEI D L RSG+VD+++VDSVAAL P+AEIEGE+GDSH+GL AR+MSQA+RKL G
Sbjct: 122 TGEQALEICDALTRSGAVDVIIVDSVAALVPKAEIEGEIGDSHVGLAARMMSQAMRKLAG 181

Query: 181 NIKRTNTLVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKKGDEVIGS 240
           N+K++NTL+IFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIK+GDEV+G+
Sbjct: 182 NLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGDEVVGN 241

Query: 241 ETKVKVIKNKVAPPFKQAEFDIMYGEGISRLGEIIELGVNLKMVEKAGAWFSYNGEKIGQ 300
           ET+VKV+KNK+A PF+QA+F I+YG+GI+R GE+++LGV  K++EK+GAW+SY G+KIGQ
Sbjct: 242 ETRVKVVKNKIAAPFRQADFQILYGQGINRTGELVDLGVLHKLIEKSGAWYSYKGDKIGQ 301

Query: 301 GKENAKEFLREHPEIAAEIEAKIR 324
           G+ NA +FL E+ EIAAEIE  +R
Sbjct: 302 GRANATKFLAENTEIAAEIEKTLR 325