Pairwise Alignments

Query, 342 a.a., Protein RecA from Methylophilus sp. DMC18

Subject, 357 a.a., recombinase A (RefSeq) from Shewanella sp. ANA-3

 Score =  488 bits (1256), Expect = e-142
 Identities = 243/342 (71%), Positives = 293/342 (85%), Gaps = 1/342 (0%)

Query: 1   MDDNKSKALAAALSQIEKQFGKGSIMRMGDADIGEDLQVVSTGSLGLDIALGVGGLPRGR 60
           +D NK KALAA LSQIEKQFGKGSIM++G+ D   D++ +STGSL LD+ALG GGLP GR
Sbjct: 3   VDPNKEKALAAVLSQIEKQFGKGSIMKLGE-DRSMDVETISTGSLSLDVALGAGGLPMGR 61

Query: 61  IVEIYGPESSGKTTLTLQVIAEMQKLGGTAAFIDAEHALDPQYASKLGVNVPDLLISQPD 120
           IVEIYGPESSGKTTLTL+VIA  Q+ G T AFIDAEHALDP YA KLGV++ +LL SQPD
Sbjct: 62  IVEIYGPESSGKTTLTLEVIAAAQREGKTCAFIDAEHALDPIYAKKLGVDIDNLLCSQPD 121

Query: 121 TGEQALEIADMLVRSGSVDIVVVDSVAALTPRAEIEGEMGDSHMGLQARLMSQALRKLTG 180
           TGEQALEI D L RSG+VD+++VDSVAALTP+AEIEGE+GDSHMGL AR+MSQA+RKL G
Sbjct: 122 TGEQALEICDALTRSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAG 181

Query: 181 NIKRTNTLVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKKGDEVIGS 240
           N+K++NTL+IFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIK+GDEV+G+
Sbjct: 182 NLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGDEVVGN 241

Query: 241 ETKVKVIKNKVAPPFKQAEFDIMYGEGISRLGEIIELGVNLKMVEKAGAWFSYNGEKIGQ 300
           ET+VKV+KNKVA PFKQAEF I+YG+GI+R GE+++LGV  K++EKAGAW+SY G+KIGQ
Sbjct: 242 ETRVKVVKNKVAAPFKQAEFQILYGQGINRTGELVDLGVAHKLIEKAGAWYSYKGDKIGQ 301

Query: 301 GKENAKEFLREHPEIAAEIEAKIRANAKVLADILPSARGEDD 342
           G+ NA ++L E+P IAAEI+  +R         + S+  +D+
Sbjct: 302 GRANAGKYLTENPAIAAEIDKTLRELLLSNPSAMSSSSSDDE 343