Pairwise Alignments

Query, 292 a.a., HTH-type transcriptional regulator MetR from Methylophilus sp. DMC18

Subject, 299 a.a., transcriptional activator protein MetR (RefSeq) from Shewanella amazonensis SB2B

 Score =  213 bits (541), Expect = 6e-60
 Identities = 105/289 (36%), Positives = 178/289 (61%), Gaps = 1/289 (0%)

Query: 1   MIERIHLAIIREVEQQGSLTAAAEKLFLTQSALSHSIKKLEQQLGTDIWLREGRSLRLTQ 60
           MIE  HL  +  +++ GSL AAA+K F+TQSALSH IK+LE ++ + +++R+ + L  TQ
Sbjct: 1   MIELRHLRTLMALKESGSLAAAAKKRFVTQSALSHQIKELETRINSPVFVRKSKPLSFTQ 60

Query: 61  AGQYLLAVANRLLPQLSLAEERLRQFAQGERGTLRIGMECHPCYQWLLKVVSPYLADWPD 120
            G  LL +A  +LP++   E  L++  + +   L++G+ECH C++WL+ V+  + A++PD
Sbjct: 61  EGARLLNLAEEILPRVMETEFVLKKGLETDAHLLKVGIECHSCFRWLMPVIETFRAEYPD 120

Query: 121 VDVDVKQKFQFGGIGALFGYEIDMLVTPDPLYKPGLLFQPVFDYEQVLVVHRQHALAQAD 180
            D+D+  +  F  + AL   E+D+++T DP+    L +Q +FD+E  LVV ++H LA   
Sbjct: 121 ADLDLSSRHLFDSLNALESGELDIVLTSDPVPGHQLAYQHLFDFEVRLVVAKEHPLASKS 180

Query: 181 YVRPEQLSSETLITYPVDIDRLDIYNQFLQPAGIRPHLHKPIETTDIMLQMVASGRGVAA 240
            V P+ L+   +I+YPV ++RLD++  FL+PAGI P + K  + T ++ Q +A   G+AA
Sbjct: 181 LVLPKDLAGLPIISYPVPLERLDLFRLFLEPAGIEPGVQKSCDLTSVLFQRIACQDGIAA 240

Query: 241 LPRWLVEEYQTRFDVVPVKLGKQGVAKQIYLGIREADIQIDYVQAFIGL 289
           LP W + E Q    +  ++LG +GV + ++   R        +Q ++ L
Sbjct: 241 LPSWSISEAQ-GLSLTSLRLGAEGVKRPLFGAYRRGSANSRQLQRYLEL 288