Pairwise Alignments

Query, 404 a.a., Type II secretion system protein F from Methylophilus sp. DMC18

Subject, 405 a.a., Type IV fimbrial assembly protein PilC from Pseudomonas fluorescens FW300-N1B4

 Score =  220 bits (560), Expect = 7e-62
 Identities = 111/399 (27%), Positives = 226/399 (56%), Gaps = 4/399 (1%)

Query: 3   LFEYKGRTEDGMMVTGVQEAADADALGAALIGTRITPIEIKPKKTSGVAINLFEEKITSL 62
           ++ ++G  + G  +TG     +   + A L    I P +++ K  S  +     ++I +L
Sbjct: 10  VYAWEGTDKKGTKMTGELTGQNPALIKAQLRKQGINPGKVRKKTASIFSAG---KRIKAL 66

Query: 63  EVMIFSKQMYTLLKAGIPIMRALSGIQSSVGNPKLAQVVGQLRVSLDSGRELSVAMTEHP 122
           ++ +F++QM T++KAG+P++++   I     NP + ++V +++  + +G   + A+ + P
Sbjct: 67  DIALFTRQMATMMKAGVPLLQSFDIIGEGFDNPNMRKLVDEVKQEVAAGNSFAAALRKKP 126

Query: 123 KVFDSFYISMIRVGETTGNLDNIFLRLSEHIEFDRFMRGQIKSALQYPMFVLTAMAIAIV 182
           + FD  Y +++  GE  G LD +  R++ + E    ++ +IK A+ YP+ V+    I   
Sbjct: 127 QYFDELYCNLVDAGEQAGALDTLLERVATYKEKSESLKAKIKKAMTYPLAVVFVAIIVTG 186

Query: 183 VINVMVIPQFEKVFASMHADLPMITKMLIAFSNFMRNYWFVLIGMIAAAGWSFKTYVKTA 242
           ++ V V+PQFE VF+   A+LP  T M+I  S FM+ +W++++GM+ A  +  +   K +
Sbjct: 187 ILLVKVVPQFESVFSGFGAELPAFTVMVIGLSEFMQAWWWMMLGMLGALIFGVRHAFKKS 246

Query: 243 SG-RSNWDRIKMRIPIAGKIIFKGTMARFARSFALSTRSGLPILSALRLVSQTVENDYIS 301
            G R   D   +++P+ G +++K  +AR+AR+ + +  +G+P++ AL  V+    N    
Sbjct: 247 PGFRDRMDTWLLKLPLVGALMYKSAVARYARTLSTTFAAGVPLVEALDSVAGATGNIVFK 306

Query: 302 AKILSMSAGIERGETILRTATQTGVFNSLVLQMIAVGEESGSLDTLMQEIADMYQADVEY 361
             +L +   +  G  +      +G+F ++ +QM A+GEESG+LD ++ ++A  Y+ +V+ 
Sbjct: 307 RAVLRIRQDVSTGMQLNFAMRTSGIFPNMAIQMTAIGEESGALDDMLDKVASFYEDEVDN 366

Query: 362 DVKTLGAQIEPILIMFLGALVLVLALGVFLPIWDMSSVM 400
            V  L + +EP +++ LG +V  L + ++LPI+ + S +
Sbjct: 367 MVDNLTSLMEPFIMVVLGVIVGGLVVAMYLPIFQLGSAI 405