Pairwise Alignments

Query, 589 a.a., hypothetical protein from Methylophilus sp. DMC18

Subject, 816 a.a., response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Shewanella loihica PV-4

 Score = 89.4 bits (220), Expect = 5e-22
 Identities = 66/223 (29%), Positives = 110/223 (49%), Gaps = 5/223 (2%)

Query: 23  FQPIIDIKQAQVFAHEALIR--GPLESKLHAPIALLNAAKLCGRDIEM-ESIARDVIFEE 79
           +QP +D+K  ++   EAL R   P   KL +P+  +  A+  G   ++ E I +      
Sbjct: 585 YQPKVDLKTKEIIGAEALARLYDP-SGKLISPLDFIPLAEETGLIHQLGEIILKQSCMAA 643

Query: 80  YRRANHAMPLFVNFSPDALLHSESDWSLSLAQ-LENYQLAASDIVIEITESSTIRDYAEL 138
                   PL +  +  A   +  ++  S+A+ LE   L +S + +E+TESS + D+ E 
Sbjct: 644 KAWQKRGRPLQIAVNIAAKQFTNPEFCDSVAKVLELTGLDSSFLELEVTESSLMYDFDEA 703

Query: 139 KEAVTKLKALGFKIALDDLGEGTSSLRLWSELSPHYVKIDKHFIANIHNDPIKLEFVRGI 198
              +  L +LG  IA+DD G G SSL        + +KID+ F+ ++  D   L+ V+ +
Sbjct: 704 LNVLNTLSSLGLSIAIDDFGTGYSSLSYLKFFPVNTLKIDQSFVKDMLGDEQSLDIVKAV 763

Query: 199 QKIALESNTLTIAEGIETKEELAVIKDLKIDYAQGYLLGRPFP 241
             +A       IAEGIE  E+L  +  L+ +  QGY+  +P P
Sbjct: 764 IHLAKSLKLKLIAEGIEDAEQLQKLVALECEQGQGYMFSKPLP 806



 Score = 49.7 bits (117), Expect = 5e-10
 Identities = 23/53 (43%), Positives = 37/53 (69%), Gaps = 1/53 (1%)

Query: 444 DLDHFKPFNDAYGYRRGDEVIQFVGRMLSSMVNHEHDFVGHIGGDDFVIVFQS 496
           D+DHFK  ND+ G+  GD+VI+ V + L S+++  +  +G IGGD+FV++  S
Sbjct: 431 DIDHFKYLNDSLGHSYGDQVIKQVAKRLQSLID-PNATLGRIGGDEFVLLLPS 482