Pairwise Alignments

Query, 589 a.a., hypothetical protein from Methylophilus sp. DMC18

Subject, 640 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score = 95.5 bits (236), Expect = 6e-24
 Identities = 79/244 (32%), Positives = 118/244 (48%), Gaps = 14/244 (5%)

Query: 14  LAQRNLLPLFQPIIDIKQAQVFAHEALIRG-PLESKLHAPIALLNAAKLCGRDIEMESIA 72
           L +  L+  +QP  D+   ++   EAL+R    E  L  P   +  A+  G    +  I 
Sbjct: 398 LEKEELVLYYQPQFDLASGRILGTEALLRWRDPERGLVPPGEFIPVAEDTGL---IGPIG 454

Query: 73  RDVIFE---EYRRANHA----MPLFVNFSPDALLHSESDWSLSLAQLENYQLAASDIVIE 125
             VI E   E RR + A    + + VN SP     S      + A  EN +L A  +  E
Sbjct: 455 EWVIGEACRELRRWHEAGATDLTMAVNLSPVQFRRSRLVEIAARALQEN-RLPAECLEFE 513

Query: 126 ITESSTIRDYAELKEAVTKLKALGFKIALDDLGEGTSSLRLWSELSPHYVKIDKHFIANI 185
           +TES  IR+ A + E +T LK LG K+++DD G G SSL      +   +KID+ FI  +
Sbjct: 514 LTESLLIREDAAILETLTALKGLGVKLSIDDFGTGYSSLAYLKRFNVDKLKIDQSFIREL 573

Query: 186 HNDPIKLEFVRGIQKIALESNTLTIAEGIETKEELAVIKDLKIDYAQGYLLGRPFP--KF 243
            ++P     V  +  +A +    T+AEG+E  E+  +++    D  QG+L GRP P   F
Sbjct: 574 CSNPDDEAIVSAVITMARQLRLRTVAEGVENAEQATMLRRFDCDEVQGFLFGRPMPAADF 633

Query: 244 QATL 247
           QA L
Sbjct: 634 QALL 637



 Score = 50.1 bits (118), Expect = 3e-10
 Identities = 37/104 (35%), Positives = 51/104 (49%), Gaps = 15/104 (14%)

Query: 399 REVTNMQIHAARYANPLTLLPGNVPINAHIDKLLE---------RRIAFVACYCDLDHFK 449
           R+    QI    + +PLT LP  V +    D+ L+          R+A +  + DLDHFK
Sbjct: 204 RKSAEEQIEYLAHHDPLTDLPNRVLLR---DRFLQAQGQAARSANRVAIL--FLDLDHFK 258

Query: 450 PFNDAYGYRRGDEVIQFVGRMLSSMVNHEHDFVGHIGGDDFVIV 493
             ND  G+  GD ++Q V   L   V  E D +   GGD+FVIV
Sbjct: 259 LVNDTLGHPIGDRLLQAVAERLRRGV-RETDTISRQGGDEFVIV 301