Pairwise Alignments

Query, 589 a.a., hypothetical protein from Methylophilus sp. DMC18

Subject, 584 a.a., diguanylate cyclase/phosphodiesterase (RefSeq) from Shewanella sp. ANA-3

 Score =  335 bits (858), Expect = 4e-96
 Identities = 207/581 (35%), Positives = 309/581 (53%), Gaps = 16/581 (2%)

Query: 9   EIEVILAQRNLLPLFQPIIDIKQAQVFAHEALIRGPLESKLHAPIALLNAAKLCGRDIEM 68
           E++ I+A+  + PLFQPI +I + ++   EAL RGP  S L++PI L   A+  G+  E+
Sbjct: 9   ELDKIIAKGAISPLFQPIFNILEHKIHGFEALSRGPEHSPLYSPIPLFKTAEHQGKLSEL 68

Query: 69  ESIARDVIFEEYRRANHAMPLFVNFSPDALLHSESDWSLSLAQLENYQLAASDIVIEITE 128
           E++ R +  E+++       LF+N SP ALL       ++L  L+   ++ S +VIE++E
Sbjct: 69  ETLCRRISLEQFKLRQFQGRLFINISPKALLGPTHPKGMTLQLLQQLGISPSQVVIELSE 128

Query: 129 SSTIRDYAELKEAVTKLKALGFKIALDDLGEGTSSLRLWSELSPHYVKIDKHFIANIHND 188
                D   LK  +   ++ GF  A+DDLG G S LRLWSELSP YVKID+HFI  I + 
Sbjct: 129 QYPADDIDLLKSCLNHYRSQGFMTAIDDLGAGYSGLRLWSELSPDYVKIDRHFIHQIDST 188

Query: 189 PIKLEFVRGIQKIALESNTLTIAEGIETKEELAVIKDLKIDYAQGYLLGRPFPKFQATLS 248
           P+K EFVR I ++        IAEGIET+EELAV+K L I Y QGYLLGRP    +A  S
Sbjct: 189 PVKQEFVRSIVELCQSLTCKVIAEGIETQEELAVLKQLGIVYCQGYLLGRP----EAQPS 244

Query: 249 EEVSTLLNKNIIRLFADQQTMVSKQATVSGLTSYQVAALPEMTNEEVYDWFHHDNNLNSI 308
             +   L  N      + Q       +   L +  +  +P +  + + D F     L ++
Sbjct: 245 RAMKATLVPN------NTQVQPRYSESAESLCTSAITVVPTLKLKHLSDTFSSQPALQAV 298

Query: 309 PVTDHKGKPLGLISRYDTIDRFARRYQKELHGKKSCTTFMDTQCLIIQKDMHILALSELI 368
            V   +  PLG+ISR   ++ F+  Y + LH   + +  MD Q L I+ +  +  +S+L+
Sbjct: 299 VVVQDQ-LPLGIISRATLLELFSTPYGRALHENHAVSEVMDPQVLQIEANEPLSIVSQLL 357

Query: 369 LQADPKYLLNGFIIVDGERYVGMGSGHALLREVTNMQIHAARYANPLTLLPGNVPINAHI 428
                  +   FII+   + +G+G    LL+ +T  +I  AR+ANPLT LPGNVPI   +
Sbjct: 358 TSESANTVAQQFIILRRGKLLGIGHTKDLLQRITEHRIKMARHANPLTDLPGNVPIQEEL 417

Query: 429 DKLLERRIAFVACYCDLDHFKPFNDAYGYRRGDEVIQFVGRMLSSMVNHEHD--FVGHIG 486
            +L  ++  F   Y DL  FKP+ND YG+ RGDEVI  V  +L   V ++ D  F+GH+G
Sbjct: 418 KRLRNQQKPFYLAYFDLCQFKPYNDIYGFCRGDEVICEVANLL---VKYKTDNCFIGHVG 474

Query: 487 GDDFVIVFQSEDWERICRDILDTVAKVMPDFYDLKDVQSGGIHIEDRLGNEHFFPFGSLS 546
           GDDFV++   E     C+ IL         FY  +  Q+  +  +DR G   +    SL 
Sbjct: 475 GDDFVVISTCEQLIERCQRILTDFEANKSLFYSAEHWQAQEMLADDRQGQACYHKLISLC 534

Query: 547 IGAVRVSAEFFASHHEVAGAMSHAKKQAKKIVGNSLFTERR 587
           +G +  +  +  + H ++   + AKKQAK         E R
Sbjct: 535 VGVLTPAHTYNCNEHSLSTLSAKAKKQAKSASNGFCLLEER 575