Pairwise Alignments

Query, 311 a.a., Motility protein B from Methylophilus sp. DMC18

Subject, 314 a.a., flagellar motor protein MotB (RefSeq) from Shewanella loihica PV-4

 Score = 63.9 bits (154), Expect = 5e-15
 Identities = 60/287 (20%), Positives = 115/287 (40%), Gaps = 47/287 (16%)

Query: 17  WLISYADFITLLFAFFVVMYATSNINLNKYRALSSSVVNAFQGQPGAVGQPQNMPQGLQT 76
           WL ++AD ++LL  FFV++ A S +++ K++ ++ S+  AF  Q     + +++P+G   
Sbjct: 17  WLATFADLMSLLMCFFVLLLAFSEMDVMKFKQIAGSMKYAFGVQNKV--EVKDIPKGTSV 74

Query: 77  ------PGLPVP-----------------------------GAQNQNGQVPSAVMKPLPL 101
                 PG P P                             G Q Q G+           
Sbjct: 75  IALEFRPGKPEPTPIEIINQQTNEMTEPTIEVQAGEDDSAGGVQQQRGEQRGGEASSTAQ 134

Query: 102 SYL-------YQEKKLRDQEKIRAMAQQLANTLGQWIEQKQITVYQSDLGVEMDISTHLL 154
                      Q+++   Q++I    +++A  L + I    I +      + + I     
Sbjct: 135 EEADSEAQAKQQQQEAASQDQINDRVKKMAQELNKEIVDGAIEIESLGQQIIIRIREKGA 194

Query: 155 FQNNQAAYTPQASQILHIISAQLKNEYRTLQVEGHSDKHTFSGMVDAESKRWTLTATQAA 214
           F +      P+   ++  +   LK+    + V GH+D    S   +  S  W L++ +A 
Sbjct: 195 FSSGSGFLQPRFKPVIRRVGELLKDVPGIITVSGHTDDMNISN--ELYSSNWDLSSKRAV 252

Query: 215 RVAATLA-ADGIAAKRLSALGLAETRPVSSSDNNLAQSLNSRITLRI 260
            VA  L    G   +R+  +G+A T P+  +D+   ++ N R+ + I
Sbjct: 253 AVAHELVRVPGFDQQRMKVVGMASTAPLVPNDSAANRARNRRVEIAI 299