Pairwise Alignments

Query, 311 a.a., Motility protein B from Methylophilus sp. DMC18

Subject, 241 a.a., OmpA/MotB domain protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 61.6 bits (148), Expect = 2e-14
 Identities = 62/246 (25%), Positives = 106/246 (43%), Gaps = 33/246 (13%)

Query: 17  WLISYADFITLLFAFFVVMYATSNINLNKYRALSSSVVNAFQGQPGAVGQPQNMPQGLQT 76
           W ++YADF+T + AFF++M+      LN     +   +  +     ++    N+      
Sbjct: 7   WKVAYADFVTAMMAFFLLMWI-----LNMTPPETKQALAGYFSTERSLFDSSNVSPVANN 61

Query: 77  PGLPVPGAQNQNGQVPSAVMKPLPLSYLYQEKKLRDQEKIR-AMAQQLANTL-GQWIEQK 134
           P   V G    + +                + K+ + EK   A+AQ+L   +    I Q 
Sbjct: 62  PF--VQGVDKLDTR----------------DFKVSETEKSHYAIAQKLKQMMMADAIPQN 103

Query: 135 QITVYQSDLGVEMDISTHLLFQNNQAAYTPQASQILHIISAQLKNEYRTLQVEGHSDKHT 194
              +   D+GV + +++ ++F+   A   P+ S++L  +   L+     L V GHSD   
Sbjct: 104 ASGISADDVGVLLRVNSDVMFKAGSAELVPEGSRVLDEVIKILREYNLYLMVRGHSD--- 160

Query: 195 FSGMVDAES---KRWTLT-ATQAARVAATLAADGIAAKRLSALGLAETRPVSSSDNNLAQ 250
            SG V A S     W L+ A  AA V   +   GI   RL  +  A+TRP+  +    ++
Sbjct: 161 -SGEVAAGSPYPSNWELSGARAAAAVRYIIEHGGIKPTRLRGIAYADTRPMEPNTTPESR 219

Query: 251 SLNSRI 256
           S N R+
Sbjct: 220 SKNRRV 225